Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2721 |
Symbol | |
ID | 5870509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3049528 |
End bp | 3050145 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641547842 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_001668954 |
Protein GI | 167033723 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0994484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGGAT GGATACGCAA GGCAGTGGCG CACTATGCCC ATGCAACGGG GCGAGGGGGC AGGTTCTACA GGAGGTTCTG CAACCCTTCC GGGCTTGAGT GGGGCGCCTA CCTCGCCAAG TGGGGTAATT TTCACTCGGT CGGCAGCAAC TTCTTCGTCA ACACAGGCTG CAAGTTTCTT GACCCTTCGC TGGTACGCAT CGGTAACAGC GTGGGGTTGT CCGACTGCAC GTTGATCGGT CATGACGGGG TGGTATTGCT GATCGAGCAC CGCTTCGGCA AGCACCTCGA TTCGGTTGGC TTCATCGATA TCAAGGACAA CTGCTTCATC GGCCATGGTG CGATCGTGAT GCCCCGCGTG ACCATCGGGC CAGAGTCCAT CGTAGCCGCA GGGGCGGTGG TGACCAAGGA TGTGCCGCCA GGCACCGTCT ATGGTGGTAA CCCGGCCGTG TTTATCTGCA CGACCGAGCA GTTGATTCAA CGGGTCGAGG CACGTTGCGA ATCCTACCCG TGGATCGACC TGGTGAAGCA GCGCAAGGGA GCCTACGACC CGGAAGTTGA ACCGTTGTTG ATGGCGCAGA GGCGCCAGTA TTTCTTCGGG GACAGCAAGA ATGGGTAG
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Protein sequence | MKGWIRKAVA HYAHATGRGG RFYRRFCNPS GLEWGAYLAK WGNFHSVGSN FFVNTGCKFL DPSLVRIGNS VGLSDCTLIG HDGVVLLIEH RFGKHLDSVG FIDIKDNCFI GHGAIVMPRV TIGPESIVAA GAVVTKDVPP GTVYGGNPAV FICTTEQLIQ RVEARCESYP WIDLVKQRKG AYDPEVEPLL MAQRRQYFFG DSKNG
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