| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2711 |
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| Symbol | |
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| ID | 5870499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3038787 |
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| End bp | 3040163 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547832 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001668944 |
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| Protein GI | 167033713 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.468733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCA GTGTTTTCGA CCTTTTCAAA ATCGGCATCG GGCCGTCCAG TTCTCACACC
GTCGGCCCGA TGCGGGCGGC CGCTACCTTT GCCCAGGCCC TGCGCGAGCA GGGGCTGCTG
GCGCGGGTAA CGCGCGTGGA GGTGCGGCTG TATGGCTCGC TGTCGGCGAC CGGGGTTGGC
CATGCCACCG ACCGTGCGTG CCTGCTTGGC CTGATGGGCC AGTGGCCAGA CCGCATCGAC
CCAGCCACTA TCGAATCGCG TATAGGCCAG GCCCTGCAGG AGCACTGCCT GATGCTCGAT
GGCAGCCATC CGCTGGCCTT CGAATATGGC CGTGACATGC TGCTGCTCGA CGAGAACCTG
CCTTATCACC CCAATGCCAT GAGCCTGGAG GCCATGGACG GGCAGGGTAG CCTGTTGTGC
CAGACGTATT ATTCGGTGGG CGGCGGTTTC ATCGTCGAGC AGGCCGAGAT CGATGCGCCG
GCAGGCGAAA CGAATGCAGT GCGACTGCCC TATGAGTTCG ACAGTGGCGC CCAATTGCTG
GCTTTGTGCA AGGGCCATGA CCTGAGCGTG GCGCAACTGA TGATGGCCAA CGAATGCGCC
TGGCGCCCGG AGGCCGAGGT CCGGGAAGGG TTACTGCGCA TCTGGGCGGC CATGCGTGAG
TGCGTGGCGA ACGGTCTGCG CAATGAGGGC ATCCTGCCAG GCGGCTTGTA CGTCAAGCGT
CGCGCCGCGC GGCTGCACCG CAGCCTGCAG GAACTGGGCA AGCCCAACGT GATTGGCTCG
ACCCTTGGCG CCATGGAATG GGTCAACCTG TTCGCTCTGG CGGTCAATGA AGAGAATGCC
GCCGGTGGGC GTATGGTTAC CGCGCCCACC AACGGTGCCG CCGGTATTAT CCCGGCGGTA
TTGCACTACT ACATGAAGTT CAATTCCAAC GCCTGCGACG CTGATGTCGT GGACTTCCTG
CTTGGCGCAG CGGCAGTCGG CATCTTGTGC AAGAAGAATG CATCGATCTC CGGTGCCGAA
GTGGGTTGCC AGGGGGAGGT CGGCTCAGCC TGCTCGATGG CCGCTGCTGG CCTGGCGCAG
GTGCTGGGGG CTACGCCGCC GCAACTGGAA AATGCGGCCG AGATTGCCCT GGAGCACAAC
CTTGGGCTGA CCTGCGACCC GGTGGGCGGC CTGGTGCAGG TGCCGTGCAT CGAGCGCAAT
GCGATTGCTG CAGTCAAAGC GATCAACGCT GTACAGATGG CGCTGCGGGG AGATGGCGAG
CACTTCATCT CGCTCGACAG GGTCATCCGC ACCCTGCGTG ATACCGGTGC GGATATGCAT
GCCAATTACA AGGAAACCTC GCGCGGCGGT TTGGCTGTTG CGTTTGTTGA GTGCTGA
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| Protein sequence | MAISVFDLFK IGIGPSSSHT VGPMRAAATF AQALREQGLL ARVTRVEVRL YGSLSATGVG
HATDRACLLG LMGQWPDRID PATIESRIGQ ALQEHCLMLD GSHPLAFEYG RDMLLLDENL
PYHPNAMSLE AMDGQGSLLC QTYYSVGGGF IVEQAEIDAP AGETNAVRLP YEFDSGAQLL
ALCKGHDLSV AQLMMANECA WRPEAEVREG LLRIWAAMRE CVANGLRNEG ILPGGLYVKR
RAARLHRSLQ ELGKPNVIGS TLGAMEWVNL FALAVNEENA AGGRMVTAPT NGAAGIIPAV
LHYYMKFNSN ACDADVVDFL LGAAAVGILC KKNASISGAE VGCQGEVGSA CSMAAAGLAQ
VLGATPPQLE NAAEIALEHN LGLTCDPVGG LVQVPCIERN AIAAVKAINA VQMALRGDGE
HFISLDRVIR TLRDTGADMH ANYKETSRGG LAVAFVEC
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