| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2699 |
|---|
| Symbol | |
|---|
| ID | 5870487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 3025537 |
|---|
| End bp | 3026427 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641547820 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_001668932 |
|---|
| Protein GI | 167033701 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGT TCAAGCGTCT GTTCGTCATG CTCGGCCCGC AAATGCGCCA CACGCCAGCG
CTGCAACGCG CAGCGGCGCT GGCGGAATCC AGTGGTGCTC TGCTGGATAT CAATGTGATC
GTCGACGACG TCGACACCTT TGGCTTGATG AGCGATGGTC GCGAGCGTGA GCGGCTGCTC
AGCGACAACC GCCAATGGCT GGCGGACGAG GCCGAGCAAC TGGGCAACGC CGGCCTCGAC
GTGTCCACCG AGCTGTTGTT GACCCGCGAC CCACTAGGCT GCGTGCTGGA GCGGGTCGAA
CGGCTGGGCT GCGACCTGCT GGTCAAGGAC GTACAGCACG AACCGGTGCT CAAACGCCTG
CTGGTCACGC CACTGGACTG GCAGTTGCTC AAGGACAGCC CGGTCGCCGT GCACCTGGTC
AGCGACATTC GCCTGCCCCT GCCCCGGCAA GTCGCCGCCG CGGTGGACCT GAACAGCCAT
GGCGCAGGCG AGCACCTGGA CGAGCAGGTA ATCCACTGCG CGCACGCCCT GGCCCTGCAA
TGCAACGCCG AGCTGCACCT GTTGCATGTG TGCGACGCGG CCAAGACCCA CATTGCCGAC
TTCGGTGCTG GCACGGTGAC CATGCCCGGC TTCGAGGGCA GCGTGCGCAC TGCGCAGCGA
GCAGCGTTCA ACCGCCTGGG CGACCATCAT CAGATCCCGC TGGAACGCAG GCATTTCCTG
GAGGGCGCAG CGATCAAGGC CATTGCTCAG TTCGTCGGCC ACAGCCGGGC CGATGTGATC
GTGATGGGCA GCCACCGGCA TGACGCGATG CAGACGTTCC TGGGTGGGAC CACGGCGCAT
GTGCTGGAGC ATCCGCTGTG TAACGTGCTG GCAATCAAGG CCTTACGCTG A
|
|---|
| Protein sequence | MSQFKRLFVM LGPQMRHTPA LQRAAALAES SGALLDINVI VDDVDTFGLM SDGRERERLL
SDNRQWLADE AEQLGNAGLD VSTELLLTRD PLGCVLERVE RLGCDLLVKD VQHEPVLKRL
LVTPLDWQLL KDSPVAVHLV SDIRLPLPRQ VAAAVDLNSH GAGEHLDEQV IHCAHALALQ
CNAELHLLHV CDAAKTHIAD FGAGTVTMPG FEGSVRTAQR AAFNRLGDHH QIPLERRHFL
EGAAIKAIAQ FVGHSRADVI VMGSHRHDAM QTFLGGTTAH VLEHPLCNVL AIKALR
|
|---|
| |