| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2693 |
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| Symbol | |
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| ID | 5870481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3019390 |
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| End bp | 3020550 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641547814 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001668926 |
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| Protein GI | 167033695 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.803594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.862711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATG CCGATGAGAT TCTTTCGGTA AACAACATCT TCAAGGTGTT CGGTCCCAAC
CCGAACATGG CCATGGAGAT GCTCCGCAAG GGCGCCGACA AGAACGAAAT CTTCAGCAAG
ACCGGCCACG TTGTCGGCGT GTTCGATGCA AGCTTTTCCG TCAAGCGTGG CGAGATTTTC
GTCATCATGG GCCTCTCGGG CTCGGGCAAG TCGACCATGG TGCGGCTGTT CAACCGCCTG
ATCGAACCCA CTTCCGGCAG CATTCACCTC AACGGCAAGG AAATTACCGG TCTTTCAGAC
AAAGCCTTGC TGGATGTGCG CCGCAAGGAA ATGGGCATGG TGTTTCAGTC CTTCGCGTTG
ATGCCGCATA TGAGCGTGCT TGAGAACACC GCCTTCGGCC TGGAAATTGC CGGTGTACCG
GAAGCCGAAC GCCACAGCCG CGCCCGTGAA GCCTTGAGCC AGGTTGGCTT GGCCGGTCAC
GAGAACAGTT ACCCGCACCA GTTGTCTGGT GGCATGCAGC AGCGTGTGGG CCTGGCCCGG
GCGTTAGCCA ACGACCCGGC GATCTTGCTG ATGGACGAGG CGTTTTCCGC ACTCGACCCG
CTGATCCGCA GCGAGATGCA GGGCGAACTG ATCCGCCTGC AGGCTGAGCA ACAACGCACC
ATCATCTTCA TTTCCCATGA CATCGAAGAA GCCATCCGCA TCGGCCATCG CATTGCGATC
ATGGAAGGTG GCCGCGTGGT GCAGATCGGC ACCCCACAAG AGCTGATCAA CCAGCCGGCC
AACGACTACG TGCGTACTTT CTTCAAGAGC TTCGACAGCT CGCGGGTGCT CAAGGCCGGC
GATGTGGCCA GGTTCGACCC GGCCGTGGTG TGCAAGGTCA ATGGCAAGGC GCCGAGCTTC
CAGGCCGGCG TGCCGTTTGG CTACCTGGTC GACGAGCGCG GGCAGTTGCT GGGCGTGGTC
GACACCGACG TCAACGGCGC CACTGCCAGT GACCGCTACA GCCTGCACGA ACAGCGCCCG
GTGTACACCG ACACGCCGCT GCACGAAGTC CTCGGGATTG CTGCCGACCT GCCGTACCCG
GTGCCGGTGC TCGACCGTCA GGGCGCCTTC AAGGGCACGC TGTCGAAGAA CGAGCTGCTG
CAGACCCTGA GCCGCAACTA A
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| Protein sequence | MSHADEILSV NNIFKVFGPN PNMAMEMLRK GADKNEIFSK TGHVVGVFDA SFSVKRGEIF
VIMGLSGSGK STMVRLFNRL IEPTSGSIHL NGKEITGLSD KALLDVRRKE MGMVFQSFAL
MPHMSVLENT AFGLEIAGVP EAERHSRARE ALSQVGLAGH ENSYPHQLSG GMQQRVGLAR
ALANDPAILL MDEAFSALDP LIRSEMQGEL IRLQAEQQRT IIFISHDIEE AIRIGHRIAI
MEGGRVVQIG TPQELINQPA NDYVRTFFKS FDSSRVLKAG DVARFDPAVV CKVNGKAPSF
QAGVPFGYLV DERGQLLGVV DTDVNGATAS DRYSLHEQRP VYTDTPLHEV LGIAADLPYP
VPVLDRQGAF KGTLSKNELL QTLSRN
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