| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2692 |
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| Symbol | |
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| ID | 5870480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3018393 |
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| End bp | 3019346 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547813 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001668925 |
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| Protein GI | 167033694 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.565238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.807022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAT TCAGCCTGCT TGACCCGTTC CAGGCGGCCA CCATCCCCTT GGGCGACTGG
GTCACCGCGA CCCTGAACTT TCTGGTGCAC AACTTCCGCG AGGTGTTCCG CGCCATTCGC
TGGCCAATCG ACCAGGTGCT CAATGGCATC GAGTTCACCC TGCAGAGCAT CCCGCCCACC
ATCGGCATCC TCCTTTCGTC ATTGCTGGGC TGGCAGCTGG CAGGCAAGCG CATGGCGGTA
CTGTGCTTCA TCACCCTGAC CTTGCTCGGC CTGATCGGTG TGTGGTCGGA GTCGATGACC
ACCCTGGCCC TGGTACTGAC GTCGGTGTTC TTCTGCGCGG TCATCGGCAT TCCGTTGGGT
ATCGTCTGCG CCCGCAGCAA CCGCCTGGAA AGCATTATCC GCCCGCTGCT CGATGCCATG
CAGACCCTGC CGGCGTTCGT TTACCTGGTC CCGGTGGTGA TGCTGTTCGG CATCGGTAAT
GTACCTGGCG TGCTGGTGAC CATCGTGTTC GCCCTGCCGC CGCTGGTGCG CCTGACCAAC
TTGGGTATTC GCCAGGTGCC GGAAGACAAG ATCGAAGCCG CCCGCGCTTT CGGCTGCACC
CCACGGCAGA TGTTGACCCG CGTGCAACTG CCGCTGGCCA CTTCGACCAT CATGGCTGGT
CTCAACCAGA CCCTGATGCT GTCGCTGTCG ATGGTGGTCA TCGCCTCGAT GATTTCGGTC
GGTGGCCTGG GCCAGATGGT ACTGCGCGGC ATCGGCCGGC TGGACATGGG CCTGGCCACG
GTCGGTGGCG TGGGGCTGGT GCTGCTGGCG ATCTTCCTCG ACCGCCTGAC CCAGGCCATG
GGCGCCCGCA CCAGTGCCGA CCCGAGCCTG CGCTGGTACC ACACTGGCCC CGCAGGCGTG
GTGATGCGCC TGTGTGGCGC AGCACCCGTG AAAGGGCGGC GCAAGACCGC CTGA
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| Protein sequence | MSEFSLLDPF QAATIPLGDW VTATLNFLVH NFREVFRAIR WPIDQVLNGI EFTLQSIPPT
IGILLSSLLG WQLAGKRMAV LCFITLTLLG LIGVWSESMT TLALVLTSVF FCAVIGIPLG
IVCARSNRLE SIIRPLLDAM QTLPAFVYLV PVVMLFGIGN VPGVLVTIVF ALPPLVRLTN
LGIRQVPEDK IEAARAFGCT PRQMLTRVQL PLATSTIMAG LNQTLMLSLS MVVIASMISV
GGLGQMVLRG IGRLDMGLAT VGGVGLVLLA IFLDRLTQAM GARTSADPSL RWYHTGPAGV
VMRLCGAAPV KGRRKTA
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