| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2690 |
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| Symbol | |
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| ID | 5870478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3016160 |
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| End bp | 3017215 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547811 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001668923 |
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| Protein GI | 167033692 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.671467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACT TCGAAAGCAT CCTCAAAAGC ACCAACCTGG CCCACCTGGC CCCGGCCATC
CGCACTTCGC TTTCAATGCC GTGCCAGCGC GTGGCCTTCG TCCTGCGCGA GCACTTCTCG
ATGATGGCCT TCACAGCGGC GATGGACAGC CTGGTCACCG CCAACCTGAT GAGCGCCACG
CCGTTGTTCC AGGTTCAGGT GGTGGGTGAG GGCGCCCAGG TGATGAGCGA CCTGGGCATC
GCCTTGCCGG TCAACACTCA GCTCGCTGAC CTGGATGTGC ACGGCCTTGA CTGCCTGCTG
GTATGTGGTG GCTTTCGCGT GCGCCTGGAA GCCGCGCCGC AACTGCGTGC CAAGTTGCGC
CAAGCCGACC AGTACGGCTG CCAACTGGGC GGGCTGTGGA ACGGCGCTTA CTTCCTGGCC
GAGGCTGGCT TGCTCAATGA TCACGACTGC GCCTTCCACC CCGATGGCCG AGCGATGATG
AACGAGCTGT TCCCCAAAGT ACGTATCAGC CGCCAGGCCC ATGTGCTGGA CCGGCGACAT
ATGAGCTGCG CCGGTGCCAG CAGTGCCTTG GACATGATGT TGGCAATGCT TGAACAGTGC
GGTGGCGTAC CCTTGCGCCG GGCCGTGGAG CAGATGCTGG CCTGTGACCG TGCGAGGGTC
TTGAGCGACG CACCTGCCAG TGCCCCGGAA ATCGACCCCA GCCTGCCCAA GGGGGTGCGC
CTGGCCCTGG AATTGATGCA TGCCAATATC GAAGACCCCA TTGGCATCGA CGAAATCGCC
GAACATGCCG GCTTGTCTCG CCGGCACTTG GAGCGGCTGT TCCGCCGCCA TGTGCAGGCC
ACACCACCGC GTTACTATCT GGAGCTGCGC CTGACCCATG CGCGCCAACT GTTGCAACAC
ACCAGCAAGT CATTGACCGA GGTGGCAGTG GCCAGCGGGT TCATCAGCTT CCCGCATTTC
TATCGGCGGT TTCGTGAGTT GTTTGCCGTT GCTCCGCGCC AATATCGTGC CCGTAGCCAG
GGGTGGGCAG GGCGGCAGGA AGAAACTGTT CGATAA
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| Protein sequence | MSHFESILKS TNLAHLAPAI RTSLSMPCQR VAFVLREHFS MMAFTAAMDS LVTANLMSAT
PLFQVQVVGE GAQVMSDLGI ALPVNTQLAD LDVHGLDCLL VCGGFRVRLE AAPQLRAKLR
QADQYGCQLG GLWNGAYFLA EAGLLNDHDC AFHPDGRAMM NELFPKVRIS RQAHVLDRRH
MSCAGASSAL DMMLAMLEQC GGVPLRRAVE QMLACDRARV LSDAPASAPE IDPSLPKGVR
LALELMHANI EDPIGIDEIA EHAGLSRRHL ERLFRRHVQA TPPRYYLELR LTHARQLLQH
TSKSLTEVAV ASGFISFPHF YRRFRELFAV APRQYRARSQ GWAGRQEETV R
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