| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2685 |
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| Symbol | benD |
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| ID | 5870473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3011022 |
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| End bp | 3011783 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547806 |
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| Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
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| Protein accession | YP_001668918 |
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| Protein GI | 167033687 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATA GATTCCAAGG CAAGGTCGCC CTGGTCACCG GTGCCGCCCA AGGCATCGGC
CGGGGTGTGT GTTGGCGGCT CAAGGCCGAG GGCGCGCAAG TGGTCGCGGT AGACCGTTCC
GAGCTGGTCC ACGAACTGGC CGGCGAGGGC ATGCTCACCC TCACTGCCGA CCTGGAGCAA
CACGCTGACT GCGCCCGAGT CATGGCCAGT GCGGTCCAAG CCTTCGGCCG CCTGGACATC
CTGGTCAACA ACGTTGGTGG CACTATCTGG GCCAAGCCTT TCGAGCATTA CGAAGTCGAG
CAGATCGAAG CCGAAGTGCG CCGCTCGCTG TTCCCGACCC TGTGGTGCTG CCATGCCGCG
CTGCCGTACA TGCTCGAACG CGGCAGCGGC GCCATCGTCA ACGTCTCGTC CATCGCCACC
CGTGGCGTCA ACCGTGTGCC CTATGGCGCG GCCAAAGGTG GCGTCAACGC GCTGACCGCG
TGCCTGGCCT TTGAAACCGC CGGCCGCGGC ATCCGCGTCA ACGCCACCGC GCCCGGCGGC
ACCGAAGCAC CGCCTCGGCG CGTGCCGCGT AACAGCGCCG AGCAGAGCGA GCAGGAAAAA
CGCTGGTACC AGCAGATCGT CGACCAGACC CTCGACAGTA GCCTGATGCA CCGCTACGGC
AGCATCGACG AGCAGGTGGG CGCCATTTTG TTCCTTGCCT CTGACGAGGC TTCGTACATC
ACCGGCGTGA CCCTGCCGGT AGGGGGCGGC GACCTCGGCT GA
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| Protein sequence | MNNRFQGKVA LVTGAAQGIG RGVCWRLKAE GAQVVAVDRS ELVHELAGEG MLTLTADLEQ
HADCARVMAS AVQAFGRLDI LVNNVGGTIW AKPFEHYEVE QIEAEVRRSL FPTLWCCHAA
LPYMLERGSG AIVNVSSIAT RGVNRVPYGA AKGGVNALTA CLAFETAGRG IRVNATAPGG
TEAPPRRVPR NSAEQSEQEK RWYQQIVDQT LDSSLMHRYG SIDEQVGAIL FLASDEASYI
TGVTLPVGGG DLG
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