| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2683 |
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| Symbol | |
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| ID | 5870471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3008693 |
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| End bp | 3009607 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547804 |
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| Product | catechol 1,2-dioxygenase |
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| Protein accession | YP_001668916 |
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| Protein GI | 167033685 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGA AAATTTCCCA AACTGGCGAA GTACAGCAGT TCTTTGCAGA GGCCGCAGGC
GTTGGCAACG ATGCCGGCAG CCCTCGGCTC AAGCGCATCG TGCAGCGTGT GCTGCAGGAC
TCTGCGCGGC TGATCGAAGA CCTGGAGATC AGCGAGGACG AGTTCTGGCA TGCCGTCGAC
TACCTGAACC GCCTGGGTGG CCGCGGCGAA GCCGGGCTGC TGGTGGCGGG CCTGGGCCTC
GAGCACTTCC TTGACCTGCT ACAGGATGCC AAGGACCAGC AGGCCGGGCT GGTCGGCGGC
ACCCCACGCA CCATCGAAGG CCCGCTGTAC GTGGCCGGTG CACCGATTGC CCAAGGTGAA
GTGCGCATGG ACGACGGTAG CGAGGAGGGC GTAGCCACGG TGATGTACCT GCAAGGCCAG
GTGCTCGACC CGCAAGGGCA GCCGCTGCCA GGCGCCACGG TGGACTTGTG GCATGCCAAT
ACCCGTGGCA CCTACTCGTT CTTCGACCAG AGCCAGTCTG AATACAACCT GCGTCGGCGC
ATCGTCACCG ATGCCGAAGG GCGTTACCGC GCACGCTCCA TCGTGCCGTC GGGTTACGGA
TGTGACCCGC AGGGGCCAAC CCAGGAGTGC CTGGACCTGC TGGGCCGCCA CGGCCAGCGC
CCGGCGCATG TGCACTTCTT CATCTCGGCG CCGGGTTACC GGCACCTGAC CACGCAGATC
AACCTGTCGG GGGACAAGTA CCTGTGGGAT GACTTTGCCT ATGCCACGCG CGATGGGCTG
GTGGGGGAAG TGGTGTTCGT CGAAGGCGAG GCGGGGCGGC ATGCCGAGTT GAAGTTCGAC
TTCCAGCTGC AGACGGCCCT GGGCGGCGCG GATGAGCAGC GCAGCAACCG GCCACGGGCG
TTGCAGGACG CCTGA
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| Protein sequence | MTVKISQTGE VQQFFAEAAG VGNDAGSPRL KRIVQRVLQD SARLIEDLEI SEDEFWHAVD
YLNRLGGRGE AGLLVAGLGL EHFLDLLQDA KDQQAGLVGG TPRTIEGPLY VAGAPIAQGE
VRMDDGSEEG VATVMYLQGQ VLDPQGQPLP GATVDLWHAN TRGTYSFFDQ SQSEYNLRRR
IVTDAEGRYR ARSIVPSGYG CDPQGPTQEC LDLLGRHGQR PAHVHFFISA PGYRHLTTQI
NLSGDKYLWD DFAYATRDGL VGEVVFVEGE AGRHAELKFD FQLQTALGGA DEQRSNRPRA
LQDA
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