| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2673 |
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| Symbol | |
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| ID | 5870461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2996167 |
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| End bp | 2997264 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547794 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_001668906 |
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| Protein GI | 167033675 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0615728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAC TCGACCATGA CCTGGCGCAG GATATCGTTG ACCGGGCGAT GGCCATCCTG
CCGTGCAACG TCAATGTCAT GGACAGCCAG GGCCTGATCC TGGGCAGTGG CGAACCGGAG
CGCATCAACA CCCGTCACGA GGGGGCACAG CTGGTGTTGG CCAACGGCCG GATCGTCGAG
CTGGATACCG ACGCAGCCAA ATGCCTGAAG GGCGTGCAGC CGGGGGTCAA CCTGCCGTTG
ATGCTCGATG GCCGGCTGAT GGGCGTGCTG GGCCTGACCG GTGACCCGCA GCAGGTGCGC
ACCTATGGCG AACTGGTACG CATGACCGCC GAAATGCTGC TGGCCCAGCG CAATCTACAG
GCAGACCAAC AGTGGCGAAG GCAGCGCTGT GACGACCTGC TGGCGCTGTT GCTGGGCGGC
AGCGGTGACT CCCCGCGCTT GCTTGACGAA GCCCGCCAAC TTGGCCTGAA ACCCCAGCTA
CCGCGGGTAC CGTGCCTGTT TGAAATTGCC TCGGGGTCAA CGGCCGAGGC GCTGGCCGCG
TGGTTGACGA GCCGATACCC GGATAGCTGG TGCGTAAGCC CGGCGCGCCA GTCGTTGTTG
TGGTGCCGCC CGGCAGGAGT AGCACTGGAT GAGCTGCGCC TGCTGGAGCG CCTGCAACGC
CATGGCTGGG AGGTCGAACG GCTGGCCCTG GGCAGTGTTG CTCAGAGCCT GGAGCAGGTA
CGTCGGGGTT ACCGCCGGGT ACGTGACCTG TTGGCCTATG GCCGCGAGGT ATTGCCCACC
CAACGCTTGC TTAGCCTGCA GCGTTACCGG CTGCCGGCAC TGCTGTGGCG CCACCGCAAC
GATGACGCAC TGGATGAGCT GCTGGAGCCG CTACAGCGTA TTCGCAGCAA GGACGGCAGT
GGCCAGTTGC TCACCACCCT ACGCGCCTGG TGTGCCCATG ACGGCCAGAG CCAGGCCTGT
GCCGATGCCC TGGGCATTCA CCGCAACAGC CTGCGCTACC GCCTGGAGCG GATTGCCGAA
CTGGGCGAGG TCGACCCGTT GCGTATGGAA GGGATGCTTA GCTTGTACCT GGGGCTACAG
CTGTTGCCGG CAGACTGA
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| Protein sequence | MFELDHDLAQ DIVDRAMAIL PCNVNVMDSQ GLILGSGEPE RINTRHEGAQ LVLANGRIVE
LDTDAAKCLK GVQPGVNLPL MLDGRLMGVL GLTGDPQQVR TYGELVRMTA EMLLAQRNLQ
ADQQWRRQRC DDLLALLLGG SGDSPRLLDE ARQLGLKPQL PRVPCLFEIA SGSTAEALAA
WLTSRYPDSW CVSPARQSLL WCRPAGVALD ELRLLERLQR HGWEVERLAL GSVAQSLEQV
RRGYRRVRDL LAYGREVLPT QRLLSLQRYR LPALLWRHRN DDALDELLEP LQRIRSKDGS
GQLLTTLRAW CAHDGQSQAC ADALGIHRNS LRYRLERIAE LGEVDPLRME GMLSLYLGLQ
LLPAD
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