Gene PputGB1_2666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2666 
Symbol 
ID5870454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2986880 
End bp2987863 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content61% 
IMG OID641547787 
Productelectron transport protein SCO1/SenC 
Protein accessionYP_001668899 
Protein GI167033668 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.239586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGCT CATGGCGTTT CCTGCTGGTA CTCGCGCTGT TCGCCGCCAG CATTCCATTT 
TGGCCACTGC AGCCGCCACA ACCGGTAGCT GAAGAAGCCG CCACGCCCTG GGGTGCCAGC
TATTTCCCCA ACATACCCCT GCTGACCCAG GACGGCGAAA AAGTGCATTT CTTCGACGAC
CTGATCAGGG ACAAGGTGGT CGCCATCAAC TTCATCTTCA CCGGCTGTTC CGATTCCTGC
CCGGTGGAAA CCGCCCGCCT GCGGCAGGTA CAGAAAATCC TCGGTGACCG TGTCGGCAAG
GATATCTTCC TCTATTCCAT CAGCATCGAC CCCTACAACG ACACCCCCGC CACCCTCAAA
CGCTATGCCG AAAAGTTCGG CATAGGCCCT GGCTGGACGC TGCTGACCGG CGAACCCGAC
GATATCGAGC AACTGCGCCG CAGCCTGGGG CTGTGGATCG ATGGCCTGGA AAACGGCCGC
TCCAAAGACC ACAACCTGAG CTTGATCATC GGTAACCAGG CCACTGGCCG CTGGATGAAG
GCTTCGCCCT TCGAAAGCCC GTATATCCTC GCCGACCGTC TGGGCAACAG CCTGCACAAC
TGGAAGCAGG CCAGCGCCCT GGCCAATGAC TATGCCCAGG CCCCGCAGGT GCGTCCGCCC
AGCAGTGGCG AGCAGATCTT CCGCACCCGC TGCTCGTCCT GCCACACCTT GGGCAACATC
GAGCCAGGCC AGCCAGGCAT CGGCCCCGAC CTGCTGGGCG TGACGCGTCA GCGTGACGCC
AACTGGCTGA CCCGCTGGCT GAAGGAGCCC GACCAGATGC TGGCCGAGAA AGACCCGCTT
GCCATGCTGC TGTATGAGCA ATACAACCGC TTGGCCATGC CCAACATGCG CCTCGGCGAT
GCCGAAGTCA GCGCATTGAT GAGCTACATC GAAGAAGAAA CCGCACGTCT GCAGACACCC
GTGGCGAATA GGGAAAACCC CTAA
 
Protein sequence
MHGSWRFLLV LALFAASIPF WPLQPPQPVA EEAATPWGAS YFPNIPLLTQ DGEKVHFFDD 
LIRDKVVAIN FIFTGCSDSC PVETARLRQV QKILGDRVGK DIFLYSISID PYNDTPATLK
RYAEKFGIGP GWTLLTGEPD DIEQLRRSLG LWIDGLENGR SKDHNLSLII GNQATGRWMK
ASPFESPYIL ADRLGNSLHN WKQASALAND YAQAPQVRPP SSGEQIFRTR CSSCHTLGNI
EPGQPGIGPD LLGVTRQRDA NWLTRWLKEP DQMLAEKDPL AMLLYEQYNR LAMPNMRLGD
AEVSALMSYI EEETARLQTP VANRENP