| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2654 |
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| Symbol | codB |
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| ID | 5870442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2968985 |
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| End bp | 2970250 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547775 |
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| Product | cytosine permease |
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| Protein accession | YP_001668887 |
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| Protein GI | 167033656 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCAC CCAGTGAATT CCCCCTAAGC GAAGCCCCGC AGTCCGCCCG CAAGGGCCTG
CTACCGATCG CGATGGTCCT GTTCAGCTTC ACCTTTTTTA CCGGCACGAT GTTCGCTGGC
GGCAAGCTGG GCATGGCCTT CGGCTTTGTC GACATGTTGT GGGTGGCAAC CCTCGGCAAC
AGCCTGCTGG CCTTTTATGC CGCAGCGCTG GCGTTCATCG CCTCGCGCAG CGGGCTCAAC
ACGGTGTTGA TGGGGCGCTT CTGTTTCGGT GAGGCGGGCA GCCGGCTTTC GGATTTTCTG
TTGGGTTTCG CTGAACTGGG CTGGTATGCC TGGGGCACGG CCACGGTAGC CATCGTGCTG
GTCAAGCTGC TGGGGTTGGC AGAGGGCTTC AGCGTACCGC TGATGGTGCT GTTCGGGCTG
GGCTTCAGTG TCACTGCCAT CATCGGCTTC AAGGGGCTGG ACGTGCTGTC GCGGGTGTCA
GTGCCATTGA TGTTCGTGCT GCTGTTGGTG TCCATGTACA TCGCCACCCG CGATGCCGGT
GGCTTTGCCG GCCTGGCCGC CGTGATACCA CACGAAACCA TGACCTTTTC AGCGGCGGTG
ACCATGGTCT TCGGCACCTT CGCCAGTGGT GCCACCCAGG CCACCAACTG GACGCGGCTG
TCACGCAGCG GCCGGGTAGC GGTGATCGCC AGCGTGGTGG CATTCCTGCT TGGCAACGGC
CTGATGGTGG TGGCCGGTGC CTGGTGCGCG ATGGTTTACC AGCAGGCCGA TATCGTCGAG
GTGATGATGC TGCAGGGCCT GTCGTTCGCG GCGGTGGTGA TGCTGTGCTT GAACCTGTGG
ACCATCCAGG GGCCGACTAT CTATAACGTG TCGGCCGCCG CCTGCCACCT GCTACGCAGT
GAGCGTCGGC GCACGGCAAC ACTGGGGGCA GCCGGGGTTG GCATCGTGCT GGCGATTGGC
GGCATGTATG AAATGCTGAT CCCGTTCCTG GTACTGCTGG GCTCGATCAT TCCGCCGGTG
GGCGGGGTCA TCATGGCCGA CTTCTGGTAT CGCCACCGTG GCAAGTACCC GGCACTGAGC
ACGGTAAGCC TGCCACGCTA CAACCTGACA GGCCTGTTTG CCTATGCCGT AGGCGCGGTA
CTGGCCTACG CCTCGCCATG GGTCGCTCCG CTGGTGGGTA TCGGCGCCTC GGCGCTGTGC
TATATCGTCA TCCATGAGCT GGGGGCACGC CGCCGGGCGC CTGGCCAGGC GGGCGTCGAG
CCGTGA
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| Protein sequence | MSSPSEFPLS EAPQSARKGL LPIAMVLFSF TFFTGTMFAG GKLGMAFGFV DMLWVATLGN
SLLAFYAAAL AFIASRSGLN TVLMGRFCFG EAGSRLSDFL LGFAELGWYA WGTATVAIVL
VKLLGLAEGF SVPLMVLFGL GFSVTAIIGF KGLDVLSRVS VPLMFVLLLV SMYIATRDAG
GFAGLAAVIP HETMTFSAAV TMVFGTFASG ATQATNWTRL SRSGRVAVIA SVVAFLLGNG
LMVVAGAWCA MVYQQADIVE VMMLQGLSFA AVVMLCLNLW TIQGPTIYNV SAAACHLLRS
ERRRTATLGA AGVGIVLAIG GMYEMLIPFL VLLGSIIPPV GGVIMADFWY RHRGKYPALS
TVSLPRYNLT GLFAYAVGAV LAYASPWVAP LVGIGASALC YIVIHELGAR RRAPGQAGVE
P
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