Gene PputGB1_2648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2648 
Symbol 
ID5870437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2964078 
End bp2964791 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content65% 
IMG OID641547771 
ProductMgtC/SapB transporter 
Protein accessionYP_001668883 
Protein GI167033652 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.496907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTGGA AAGTATTTTT ACTGCGCGTT GCCATTGCCC TGCTGCTGGG GGCGTTGATC 
GGTGCCGAAC GGCAATTGCG CCAACGCCTG ACCGGGCTGC GCACCAATGC ACTGGTCAGT
ACCGGTGCCT GCCTGTTCGT GCTGATGACC CAGGCAGTGC CAGGCATGGC GCCTGCCGAT
GCGTCGCGCG TGGCCGCCTA TGTCGTGTCG GGCATCGGCT TTCTGGGTGG CGGCGTGATC
ATGCGCGACG GTTTCAACGT GCGTGGCCTG AACACCGCAG CCACCTTGTG GTGCACGGCT
GCGGTCGGCG TGCTGTGCAG CCTTGGGCTG CTGTTGGAGG CTGCGCTGGG TAGCCTGGTG
GTGCTGTGCG CCAATATCCT GCTGCGCGAC ATCGCCCAGC GCCTGGACCG TCAGGACGTG
GTGCCGGCCA GCGAGGTGGA GCAGCACTTC GAAGTACGTA TCGTCTGCCG CGCCGAGGAC
GAGATTCAGG TGCGCAGCCT GATGCTGCAT AGCCTGGGCG ACCCGCAACT GCGGCTGCAG
TCACTGCAGA GCGCAGACCT GGACAACCCT GCACGCCTGG AAGTACGTGC CGAACTGCTG
GGCACCACGC AGGCGCCGGC GCAGCTGGAG CGGCTGGTCA GCCGGGTCAG CCTGGAGAAA
GGTGTAAGCT CGGTGCGCTG GCAATTACAG CCGCAGGTGT TGGCGGCTGA TTAG
 
Protein sequence
MDWKVFLLRV AIALLLGALI GAERQLRQRL TGLRTNALVS TGACLFVLMT QAVPGMAPAD 
ASRVAAYVVS GIGFLGGGVI MRDGFNVRGL NTAATLWCTA AVGVLCSLGL LLEAALGSLV
VLCANILLRD IAQRLDRQDV VPASEVEQHF EVRIVCRAED EIQVRSLMLH SLGDPQLRLQ
SLQSADLDNP ARLEVRAELL GTTQAPAQLE RLVSRVSLEK GVSSVRWQLQ PQVLAAD