Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2648 |
Symbol | |
ID | 5870437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2964078 |
End bp | 2964791 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547771 |
Product | MgtC/SapB transporter |
Protein accession | YP_001668883 |
Protein GI | 167033652 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.496907 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTGGA AAGTATTTTT ACTGCGCGTT GCCATTGCCC TGCTGCTGGG GGCGTTGATC GGTGCCGAAC GGCAATTGCG CCAACGCCTG ACCGGGCTGC GCACCAATGC ACTGGTCAGT ACCGGTGCCT GCCTGTTCGT GCTGATGACC CAGGCAGTGC CAGGCATGGC GCCTGCCGAT GCGTCGCGCG TGGCCGCCTA TGTCGTGTCG GGCATCGGCT TTCTGGGTGG CGGCGTGATC ATGCGCGACG GTTTCAACGT GCGTGGCCTG AACACCGCAG CCACCTTGTG GTGCACGGCT GCGGTCGGCG TGCTGTGCAG CCTTGGGCTG CTGTTGGAGG CTGCGCTGGG TAGCCTGGTG GTGCTGTGCG CCAATATCCT GCTGCGCGAC ATCGCCCAGC GCCTGGACCG TCAGGACGTG GTGCCGGCCA GCGAGGTGGA GCAGCACTTC GAAGTACGTA TCGTCTGCCG CGCCGAGGAC GAGATTCAGG TGCGCAGCCT GATGCTGCAT AGCCTGGGCG ACCCGCAACT GCGGCTGCAG TCACTGCAGA GCGCAGACCT GGACAACCCT GCACGCCTGG AAGTACGTGC CGAACTGCTG GGCACCACGC AGGCGCCGGC GCAGCTGGAG CGGCTGGTCA GCCGGGTCAG CCTGGAGAAA GGTGTAAGCT CGGTGCGCTG GCAATTACAG CCGCAGGTGT TGGCGGCTGA TTAG
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Protein sequence | MDWKVFLLRV AIALLLGALI GAERQLRQRL TGLRTNALVS TGACLFVLMT QAVPGMAPAD ASRVAAYVVS GIGFLGGGVI MRDGFNVRGL NTAATLWCTA AVGVLCSLGL LLEAALGSLV VLCANILLRD IAQRLDRQDV VPASEVEQHF EVRIVCRAED EIQVRSLMLH SLGDPQLRLQ SLQSADLDNP ARLEVRAELL GTTQAPAQLE RLVSRVSLEK GVSSVRWQLQ PQVLAAD
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