| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2646 |
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| Symbol | |
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| ID | 5870435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2962305 |
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| End bp | 2963198 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641547769 |
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| Product | bile acid:sodium symporter |
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| Protein accession | YP_001668881 |
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| Protein GI | 167033650 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0385] Predicted Na+-dependent transporter |
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| TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.571018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.498047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCT CGCCCTTGCT CACAGCCTTT CTGCCGCTTG CCCTGGGCAT CATCATGCTC
GGCCTGGGGT TGTCGCTCAC CCTGGCTGAT TTCGCTCGCG TGGTGAAGTA CCCCAAGCCG
GTGGTGGTAG GCCTGGCCTG TCAGATCCTG CTGCTGCCGC TGGTGTGCTT CCTGATCGCC
AACGGCTTTG GTCTGGAGTC TGCCTTGGCA GTGGGGCTGA TGCTGCTGGC CGCCTCGCCA
GGCGGCACCA CGGCCAACCT GTTCAGCCAC CTGGCTCATG GTGACGTGGC GTTGAATATT
ACCCTGACGG CGGTCAACTC GCTGATTGCG ATCCTGACCA TGCCGTTGCT GGTGAACCTG
TCGCTGAGCT GGTTCATGGC TTCGGACCAG GCTATCCCAT TGCAGTTCGC CAAGGTCATG
CAGGTGTTTG CCATTGTCTT GCTGCCGGTG GCGCTGGGCA TGCTGATTCG CCATTTCGCC
CCGGCATTCG CCGCGCGCAT GGAAAAGCCG ATGAAACTGG TAGCGGCGCT GTTTCTGGCC
TTCACCATCG TCTTGGCATT GGCCAAGGAC TGGCAGACCG TGGTCGAGTA CGCACCGGTG
GTAGGCCTGG CCGCGCTGCT GTTCAACCTG CTGAGCCTGA CGGTGGGCTA TTGGGTACCA
CGGCTGCTGA ACATCCCCAA GCGCCAGGCG ATTGCCATCG GCATGGAGAT CGGCATCCAT
AACGGGACCT TGGCCATTGC CCTTGCATTG AGCCCGTCGC TGCTGAACAA CGCGACCATG
GCAGTGCCGG CTGCGTTGTA CAGCCTGATC ATGTTCTTTA CTGCGGCTGG GTTCGGCTGG
TGGGTCAGCC GAGGGCAGGT GGCGGCGCAA CCCAAAGGGG AAACGGCGAA TTGA
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| Protein sequence | MTASPLLTAF LPLALGIIML GLGLSLTLAD FARVVKYPKP VVVGLACQIL LLPLVCFLIA
NGFGLESALA VGLMLLAASP GGTTANLFSH LAHGDVALNI TLTAVNSLIA ILTMPLLVNL
SLSWFMASDQ AIPLQFAKVM QVFAIVLLPV ALGMLIRHFA PAFAARMEKP MKLVAALFLA
FTIVLALAKD WQTVVEYAPV VGLAALLFNL LSLTVGYWVP RLLNIPKRQA IAIGMEIGIH
NGTLAIALAL SPSLLNNATM AVPAALYSLI MFFTAAGFGW WVSRGQVAAQ PKGETAN
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