| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2641 |
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| Symbol | |
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| ID | 5870430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2957913 |
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| End bp | 2958500 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641547764 |
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| Product | nucleoside phosphorylase-like protein |
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| Protein accession | YP_001668876 |
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| Protein GI | 167033645 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01705] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.345305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.468539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTGA TCAAGCAATT CCCCGACATT TCCCTGAATG ACACGCTGTT CGTTTTCGCC
CTCGAGGCCG AGGCTGGCGA TGTGTTCAAC GAGGTGAACA CCGTGTTCAC TGGCATTGGC
AAGGTCAATG CGGCTATTGC GCTCACCAAA GCGATCGCAA CGCGCAAGCC CAAGCTTATC
GTCAACCTTG GCTCAGCTGG CAGCCAGCGC CATGGCAAGG GCCAGGTGGT GTGCTGTAAC
CGCTTCGTGC AACGCGACAT GGACGTGACC CCACTGGGCT TTGCCCGCTA CGAAACACCC
TTGTCGGATA TCCCGGTAGT ACTGGAGCAT GGGGCAGTGA TCCCCGGCCT GGCCCTGGAA
GCCTGTGGCA GCGGTGACAG CTTCGAAATC AACCACGGCG ATGCACCTTA CGACGTGGTC
GATATGGAAG CCTATGTGCT GGCGTTGATC GCGCGTGACG AAGGCATTCC GTTTGTTTGT
CTGAAGTATG TTTCCGACGA TGCCGGCAGC GATGCGGCGG GGGATTGGTC GGTGCAGGTG
CACCTCGCGG CCGAGGCGTT CAAGCGGGTC CTGTTCAGCC AGGCTTGA
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| Protein sequence | MMLIKQFPDI SLNDTLFVFA LEAEAGDVFN EVNTVFTGIG KVNAAIALTK AIATRKPKLI
VNLGSAGSQR HGKGQVVCCN RFVQRDMDVT PLGFARYETP LSDIPVVLEH GAVIPGLALE
ACGSGDSFEI NHGDAPYDVV DMEAYVLALI ARDEGIPFVC LKYVSDDAGS DAAGDWSVQV
HLAAEAFKRV LFSQA
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