Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2623 |
Symbol | |
ID | 5870412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2940718 |
End bp | 2941026 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641547746 |
Product | hypothetical protein |
Protein accession | YP_001668858 |
Protein GI | 167033627 |
COG category | [S] Function unknown |
COG ID | [COG3162] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.310407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACCCG AACGCATAGA AAGCATCGCC AACCACCCCG ACTTCCAGCA CCTGGTGCGG CGCAAGCGCC GTCTCAATGG CAGCCTGACC CTGGCCATGC TGGTGATCTA CTACGGCTTC GTCCTGCTGG TGGCGTTCTC GCCCAGCACA TTGGGCCAGT CCCTCAGCGG CGGCGTGACC ACTGTCGGCA TGCTGGTGGG CGTGCTGATG GTGCTGCTGT CCTTCGCCCT TACCGGCATC TATGTGCACC GCGCCAACAA CGTGCTCGAC CCGCTCAACG ACAAGGTCAA GCAGGAGTGC GCACAATGA
|
Protein sequence | MTPERIESIA NHPDFQHLVR RKRRLNGSLT LAMLVIYYGF VLLVAFSPST LGQSLSGGVT TVGMLVGVLM VLLSFALTGI YVHRANNVLD PLNDKVKQEC AQ
|
| |