Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2616 |
Symbol | |
ID | 5870405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2934006 |
End bp | 2935226 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641547739 |
Product | beta-ketoadipyl CoA thiolase |
Protein accession | YP_001668851 |
Protein GI | 167033620 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02430] beta-ketoadipyl CoA thiolase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.232956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAC CGACCCTCGC CGATGCCTTG ATCATCGACG CCGTGCGCAC CCCCATTGGC CGCTATGCCG GCGCCTTGAG CAGCGTTCGC ACCGACGACC TCGCGGCCGT CCCGCTCAAG GCGTTGATCC AGCGCCACCC CGAACTGGAC TGGAAGGCCG TTGATGACGT GATCCTCGGG TGCGCCAACC AGGCAGGCGA AGACAACCGC AACGTGGCCC ACATGGCCAG CCTGCTGGCC GGGCTACCGC TCGAAGTGCC GGGGACTACC ATCAACCGCC TGTGCGGTTC TGGCCTGGAT GCCATCGGCA ATGCGGCCCG CGCCCTGCGC TGTGGCGAGG CTGGGCTGAT GCTGGCTGGC GGCGTGGAGT CGATGTCGCG TGCGCCGTTT GTAATGGGTA AGTCGGAACA GGCATTCGGC CGCACGGCGG AACTGTTCGA CACCACCATC GGCTGGCGTT TCGTCAACCC ACGGATGAAG GCCGCCTACG GTACCGATTC GATGCCGGAA ACTGCCGAGA ACGTGGCTGA GCAGTTTGGT ATTTCCCGCG CCGACCAGGA TGTTTTCGCC CTGCGCAGCC AGCACAAGGC TGCCGCAGCG CAGGCCCGAG GCCGCCTGGC CCGGGAAATC GTGCCGGTCG AGATTGCGCA GCGCAAAGGC CCGGCCAAAG TGGTCGAGCA TGACGAGCAC CCACGCGGCG ACACGACGCT GGAGCAGTTG GCCAAGCTGG GTACTCCATT CCGAGAGGGG GGGAGCGTAA CCGCCGGCAA TGCCTCCGGG GTCAATGACG GCGCGTGCGC CCTGCTACTG GCCAGCAGCG ACGCTGCCCG CCTGCATGGT CTGAAAGCGC GCGGTCGCAT CCTCGGCATG GCCGTGGCCG GGGTTGAGCC GCGGCTGATG GGCATCGGCC CGGTGCCGGC AACCCGCAAG GTACTTGAAA TGACTGGGTT GTCGCTGGCT GACCTGGATG TCATCGAGCT CAACGAGGCC TTCGCCGCAC AAGGTCTGGC CGTGTTGCGC GAGCTAGGCC TGACTGACGA CGACGCGCGG GTCAACCGCA ACGGTGGCGC GATTGCCCTG GGCCATCCGC TGGGCATGAG CGGTGCGCGG CTGGTGACCA CGGCGCTGCA CGAGCTGGAA GAGACGGGCG GTCGTTACGC CTTGTGCACC ATGTGCATCG GCGTTGGCCA GGGCATTGCC ATGGTCATCG AGCGCCTCTG A
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Protein sequence | MTEPTLADAL IIDAVRTPIG RYAGALSSVR TDDLAAVPLK ALIQRHPELD WKAVDDVILG CANQAGEDNR NVAHMASLLA GLPLEVPGTT INRLCGSGLD AIGNAARALR CGEAGLMLAG GVESMSRAPF VMGKSEQAFG RTAELFDTTI GWRFVNPRMK AAYGTDSMPE TAENVAEQFG ISRADQDVFA LRSQHKAAAA QARGRLAREI VPVEIAQRKG PAKVVEHDEH PRGDTTLEQL AKLGTPFREG GSVTAGNASG VNDGACALLL ASSDAARLHG LKARGRILGM AVAGVEPRLM GIGPVPATRK VLEMTGLSLA DLDVIELNEA FAAQGLAVLR ELGLTDDDAR VNRNGGAIAL GHPLGMSGAR LVTTALHELE ETGGRYALCT MCIGVGQGIA MVIERL
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