| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2614 |
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| Symbol | |
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| ID | 5870403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2932063 |
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| End bp | 2933580 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547737 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | YP_001668849 |
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| Protein GI | 167033618 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02279] 3-hydroxyacyl-CoA dehydrogenase PaaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.976535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.180911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAC TCGCAAGCAA TGTGCAGGTG GCGGTGATCG GTGCCGGTGC CATGGGCGCC
GGTATCGCCC AGGTGGCGGC CCAGGCCGGC CACCCAGTGA AGCTCTATGA CAACCGCCCG
GGGGCAGCTG CCCAGGCAGT GGCGGGTATT GATCGGCAGC TGGCCCGGCA AGTGGAAAAG
GGCAAGCTGC AGGCCGTTGA ACGGGAAGCG ATCAGCGCCC GTCTGTGCCC GGTCGATACG
CTCGAAGCTC TGGCCGATGC CGGCCTGGTG ATTGAAGCCA TCGTCGAAAA CCTGCAGGTG
AAACAGGCGC TGTTCAGTCA GCTCGAAACC CTGTGCGGCG CCGACTGCAT TCTTGCCAGC
AACACGTCGT CGCTGTCCAT CACTAGCCTT GCTGCCGGTC TTGAGCGCCC GCAGCACGTG
GTCGGCATGC ACTTCTTCAA CCCTGCTCCG TTGATGGCGC TGGTCGAAGT GGTGTCTGGC
CTGGCAACCG CCCCGACAGT TGCCGCATGC ATCTATGCCA CTGCCCAGGC CTGGGGCAAA
CAGCCGGTGC ACACGCGCTC TACACCGGGG TTTATCGTCA ACCGTGTGGC GCGGCCGTTT
TATGCCGAAA GCCTGCGCCT GCTGCAAGAA GGTGCCGCCG ATTGCGCCAG CCTCGATGCG
CTGCTGCGCG AGGCCGGGGG CTTCCGCATG GGGGCGTTCG AACTCACCGA CCTGATCGGC
CACGACGTCA ATTACGCTGT CACTTGCTCG GTTTTCGATG CGTTCTATGG TGATTTCCGC
TTCCAGCCAT CACTGGTGCA GAAAGAACTG GTGGACGCCG GTCGCCTTGG GCGCAAGACC
GGCCAGGGCT TCTATAGCTA TGCCGAGGGC GCCGAACGCC CCCAGCCTGC CGAACTGCAC
AGCCTCGCCA TTGCAGGTGC CTGCGTTGTC GAGGGCTGCC TGGGCGTGAT GCAACCGCTG
GCCGAACGCC TGCGCCAAAG CGGCATTGCC GTGACCCAGC GCGCCGGCAG CGGCCTGATC
CAGGTGGGCG ATGCCACCCT GGCCCTGTCC GACGGCCGTT TGGCCAGCCA ACGCGCCCGT
GAAGACGGCC TGCGCAACCT GGTGCTGCTC GACCTCGCGC TGGACTACGG CAGCGCCACG
CGTATCGCCA TTAGCTGGTC GGCCGATACC AGCGAAAGTG CCCGCGACCA AGCCGTTGCC
CTGCTGCAGC GCGCAGGCCT TAAAGTGACC GGCGTCGCCG ACCTGCCAGG CCTGGTGGTA
CTGCGCACCG TCGCGATGCT CGCCAACGAA GCCGCCGATG CCGTGTTGCA GGGTGTCGGC
AGCGCTGCCG ACATCGACCT GGCCATGCGC GCCGGCGTCA ATTACCCCTG CGGCCCTCTG
GCCTGGGCCG CGAACATCGG TATTGGCCAC ACCCTGCGCG TACTGGACAA CCTGCAACGC
AGCTATGGCG AGAGTCGCTA CCGCCCTTCC CTGCTGTTGC GCCGCTGCGA AGCCAAAGGA
GGCACCCTGC ATGACTGA
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| Protein sequence | MSALASNVQV AVIGAGAMGA GIAQVAAQAG HPVKLYDNRP GAAAQAVAGI DRQLARQVEK
GKLQAVEREA ISARLCPVDT LEALADAGLV IEAIVENLQV KQALFSQLET LCGADCILAS
NTSSLSITSL AAGLERPQHV VGMHFFNPAP LMALVEVVSG LATAPTVAAC IYATAQAWGK
QPVHTRSTPG FIVNRVARPF YAESLRLLQE GAADCASLDA LLREAGGFRM GAFELTDLIG
HDVNYAVTCS VFDAFYGDFR FQPSLVQKEL VDAGRLGRKT GQGFYSYAEG AERPQPAELH
SLAIAGACVV EGCLGVMQPL AERLRQSGIA VTQRAGSGLI QVGDATLALS DGRLASQRAR
EDGLRNLVLL DLALDYGSAT RIAISWSADT SESARDQAVA LLQRAGLKVT GVADLPGLVV
LRTVAMLANE AADAVLQGVG SAADIDLAMR AGVNYPCGPL AWAANIGIGH TLRVLDNLQR
SYGESRYRPS LLLRRCEAKG GTLHD
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