Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2612 |
Symbol | |
ID | 5870401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2930461 |
End bp | 2931234 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641547735 |
Product | enoyl-CoA hydratase-isomerase |
Protein accession | YP_001668847 |
Protein GI | 167033616 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.40881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0709716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGAT ATCTCGCTGT GCAGGCGCCC GAACACGGCG TTCAGCTCAT TACCTTGCAA CGGCCCGAGG CCTTGAATGC CCTGTGCACC GAGCTACTGG CAGAACTGGC TGCTGCGTTA CAGGCAGCCG CTGGCGACGA ACAGATCGGC GCTGTTGTGA TTACCGGCAG CGCCAAGGCA TTCGCTGCAG GTGCCGACAT CCGGGAAATG GCCGAGCGCG ACCTGGTCGG CATACTCAAT GATCCGCGCG TAGCCCACTG GCAAAGCATC GCGGCATTCA CCAAGCCATT GATTGCCGCT GTCAATGGTT ACGCCTTGGG TGGCGGTTGC GAACTGGTGA TGTGCGCCGA CATCGTCATC GCTGGCACCG ATGCCCGCTT CGGCCAGCCA GAAATCAACC TCGGCATCAT TCCCGGTGCC GGCGGCACCC AGCGCCTGTT GCGTGCCGTC GGTAAGCCGC TGGCCATGCA GATGGTTCTG ACCGGTGAAG CAATCACCGC TCGCCACGCC CAGCAGGCGG GCCTTGTCAG CGAAATTTCC CAGCCCGAAC TTACCGTCGA GCGCGCCATG CGGGTCGCCC GCAGCATCGC TGCCAAGGCG CCGCTTGCCG TGCGCCTGGC CAAGGAGGCG CTACTGAAGG CCGGTGATAC CGACCTGGCC AGTGGCCTGC GCTTCGAACG CCATGCGTTC ACCTTGCTGG CCGGTACCGC CGACCGGGAC GAAGGCATCC GGGCCTTTCA GGAAAAGCGC CAGGCTCGTT TCCAGGGCCG CTAA
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Protein sequence | MPRYLAVQAP EHGVQLITLQ RPEALNALCT ELLAELAAAL QAAAGDEQIG AVVITGSAKA FAAGADIREM AERDLVGILN DPRVAHWQSI AAFTKPLIAA VNGYALGGGC ELVMCADIVI AGTDARFGQP EINLGIIPGA GGTQRLLRAV GKPLAMQMVL TGEAITARHA QQAGLVSEIS QPELTVERAM RVARSIAAKA PLAVRLAKEA LLKAGDTDLA SGLRFERHAF TLLAGTADRD EGIRAFQEKR QARFQGR
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