Gene PputGB1_2602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2602 
Symbol 
ID5870391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2922651 
End bp2923091 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content57% 
IMG OID641547725 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001668837 
Protein GI167033606 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0876876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0155112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCGAAT TAGACATCAA AGATCGGGAA ATCCTCGAGA TACTTTCCAA GGAAGCACGC 
GTGGCACTCA AAGCGCTGGC GGCAAGAATC GGCCTGTCGC GAAGTGCTAC CAGCGAGCGG
GTTTTGCAGC TGGAGCGTAG CGGGGTCATT CGCGGCTACC GTGCCGACAT TGGTGAAATC
GATGCCAATG TAATACGGGC GATTATCCTG GTAGCACTGA AACGTACACC AGCACTCGGG
CTGCTGGACC TGCTGGCACA AAACGCCCAG GTGAAACGGG TTTCATCGGT CAGCGGGCAA
CTCGACCTGG TGGTCGAAGT AGAGGCGAGG ACGATCGATG ACTTGAACCG GGTACGAGAC
GCTGTGGCGT GCCATGACTC TGTAGACGAC ATCACTACGG CGGTGGTGCT ACGGCGCGAT
ATTGACCGCC AAAAAGCCTG A
 
Protein sequence
MRELDIKDRE ILEILSKEAR VALKALAARI GLSRSATSER VLQLERSGVI RGYRADIGEI 
DANVIRAIIL VALKRTPALG LLDLLAQNAQ VKRVSSVSGQ LDLVVEVEAR TIDDLNRVRD
AVACHDSVDD ITTAVVLRRD IDRQKA