Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2602 |
Symbol | |
ID | 5870391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2922651 |
End bp | 2923091 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641547725 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001668837 |
Protein GI | 167033606 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0876876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0155112 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGCGAAT TAGACATCAA AGATCGGGAA ATCCTCGAGA TACTTTCCAA GGAAGCACGC GTGGCACTCA AAGCGCTGGC GGCAAGAATC GGCCTGTCGC GAAGTGCTAC CAGCGAGCGG GTTTTGCAGC TGGAGCGTAG CGGGGTCATT CGCGGCTACC GTGCCGACAT TGGTGAAATC GATGCCAATG TAATACGGGC GATTATCCTG GTAGCACTGA AACGTACACC AGCACTCGGG CTGCTGGACC TGCTGGCACA AAACGCCCAG GTGAAACGGG TTTCATCGGT CAGCGGGCAA CTCGACCTGG TGGTCGAAGT AGAGGCGAGG ACGATCGATG ACTTGAACCG GGTACGAGAC GCTGTGGCGT GCCATGACTC TGTAGACGAC ATCACTACGG CGGTGGTGCT ACGGCGCGAT ATTGACCGCC AAAAAGCCTG A
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Protein sequence | MRELDIKDRE ILEILSKEAR VALKALAARI GLSRSATSER VLQLERSGVI RGYRADIGEI DANVIRAIIL VALKRTPALG LLDLLAQNAQ VKRVSSVSGQ LDLVVEVEAR TIDDLNRVRD AVACHDSVDD ITTAVVLRRD IDRQKA
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