| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2597 |
|---|
| Symbol | |
|---|
| ID | 5870386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 2916465 |
|---|
| End bp | 2916890 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641547720 |
|---|
| Product | putative signal peptide protein |
|---|
| Protein accession | YP_001668832 |
|---|
| Protein GI | 167033601 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0449231 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCGC ATCGTTTACG CATAGCGACG TTGGCAATCG CCTGCACGTT TGGCGTGCTG
CTAACCCAAG GTTGTTCCAA ACCGGATCAA CAACAAACAC AGCAGGCACC TGCGGGCGCC
CAAGCAGCGA CCAAGCTGGG CGACCTCAGC CCATTCCGGG CCATTGCCGA GGATGTGGCG
GCCAAGGTCG ATGCCCAGGA CTTGCCGGCT GCCAAGGCCC GCATCAAAGA CCTGGAAAAA
AGCTGGGACG ACGCCGAGGC CGGGATCAAG CCACGCGCGG CCAGCGACTG GCATGTACTG
GACAAGGCTA TCGATCGGGC ACTCGATGCA CTGCGTGCAG GCCAGCCGCA GCAGGATGAC
TGCAAAGCGG CAATGGATGC CCTGTTGAAA GCTTTCGACA ACCTGCAAAG GCCACGACAA
GGTTGA
|
|---|
| Protein sequence | MISHRLRIAT LAIACTFGVL LTQGCSKPDQ QQTQQAPAGA QAATKLGDLS PFRAIAEDVA
AKVDAQDLPA AKARIKDLEK SWDDAEAGIK PRAASDWHVL DKAIDRALDA LRAGQPQQDD
CKAAMDALLK AFDNLQRPRQ G
|
|---|
| |