Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2586 |
Symbol | |
ID | 5870375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2904273 |
End bp | 2906816 |
Gene Length | 2544 bp |
Protein Length | 847 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641547709 |
Product | response regulator receiver modulated GAF sensor protein |
Protein accession | YP_001668821 |
Protein GI | 167033590 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.251983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCA ACCCCCAAGT AAACCTGACC AACTGCGACC GCGAGCCCAT CCAGACGCCC GGCAGCATCC AACCCCACGG CTGCCTGCTG GCCTGTGATG CATCGGCGAC CGTGGTCCTG CGCCATTCAG TCAACGCCCC GGATGTGCTT GGCATAACAG GCGATATCAA CGGCCAGAAG CTGCAAGCGG TGCTAGGGGA CGAGGTAGCC CACACCTTGC GCAACGCGTT GGCCCGTACT CGCGAAGCCT CGCGCCCTGC ACTCAGCTTC AGCGTTAGGC TGCCTAACGG CCAGGCTTTC GATGTCGCCG CCCACCTGTT CAAAGGCACT GCGATCCTGG AGTTCGAACC GGCCGGCGCC AGCATCGCCG AGCCTATTGA ACTGGCGCGA ACCCTGATTG CCCAGCTGCG CGAAATCGAA CAAACCAGCA AATTGTTCCG CGACGCCGCC CGCTTTGTCC GGGCAGTGCT TGGCTATGAC CGGGTGATGA TCTACCAGCT AGGCACCGAC GGTGCCGGCA AGGTGGTCGC AGAGGCCAGG CGCAGCGACC TCGAAAGCTT CATGGGCCAG TACTTTCCCG CGTCCGACAT CCCGCAGCAG GCCCGTGCGC TTTATCTGCG CAACCCGATC CGGGTCATTT CCGACGCCCA GTTCAAAACG GTGGCCATCG AGCCTGTCCT CGATCCGTCA GGCGAACCGC TCGACCTGTC CTACGCGCAC CTGCGCAGCG TGTCGCCGAT CCATTGCGAG TACCTGTGCA ACATGGGCGT GGGCGCCTCG ATGTCGATAT CGGTGATCGT CAACGGCGAA CTGTGGGGGA TGATCGCCTG CCACCACTAT GCACCCCGCA CGCTGGCCAT GGGGCAGCGG GTAGCCGCGG AGATGTTCGG CGAGTTCTTC TCCCTGCACA TCGAGACCTT GCGCAGCCGG CAGAAGCTCG AAGCTGCCGT GCAGGTTCAC AAAGCGCTGG ACAGCATGCT GCGCGACGCC AACCAGACCG CTGACATCGA TTCGTTCTTC CACGCACGCC TGCCACGGTT GATGTCGCTG ATCCCCTGCG ATGGCATCGG CATGTCGCTA CAAGGCCGCT GGTCAACCGT CGGCCTGGCG CCGCCTAAAA CGGCCGTCCC CGATTTGCTG CGCCTGGCAG ACATGGTCAG CGAAGGCCGG ACCTGGGCGT CCAACCGTCT GTCGATGGTA TTACCTTCAG CCCAGGCATA CTTCACCGAA GTATCGGGCG TCCTGATCAT CCCGATGTCG CAGCAGCCGA GGGACTACCT GATCTTCTTC CGCAAGGAGG TGGTCGAGAC GCTCGACTGG GCCGGGGACC CGAACAAGAC CTACGACAGC GGCTTGCTGG GCGACCGCCT GACACCCCGC AAAAGCTTTG CCATCTGGAA AGAAACCGTT CACCAGCAGT CGCTGCCCTG GACCGAACAG GACCGCCAGT TTGGCGACTC CATCCGTACC GCCATCGTCG AAGTGGTGCT GTACAACAGC GAACTACTGG CCAGCGAGCG CACGAAGGCG GAAGTGCGCC AGCGCATCCT CAACGAAGAA CTCAATCATC GGGTCAAGAA CATTCTGTCG TTGATCGGCG CTCTGGTTGC CCACCCGACC TCGGAAAGCC AGACACTGCA GGACTACGTG GCGACACTGA AGGGGCGCAT CCAGGCGTTG TCTCTCGCTC ACGATCAAGT GGTACGTGGT GATGGTGGCG GGCGACTGGC CAAGCTGCTG GAGGCAGAGC TTTCACCCTA CCGCACCGCC GCTGGGGTGA TCGAGCTGCA GGGCCCGAAT GTTACCCTTG ATGCCCGCGC CTATTCGGTC ATGGCTTTGG TGCTGCACGA GCTGGCAACC AATGCCGCCA AATACGGCGC GCTGTCGCGG GCTGGCGGCA AGCTTGCAGT GAGCTGGGCC ATCGACGCTA CCAACGCCTG CGCCATCAGT TGGCGTGAAA GCGGCGGGCC AACGGTTCGG CCACCTACCC GCAATGGCTT TGGCTCGGTG CTGATCGACC GCAGTATCCC GTTCGACCTT GGCGGCACGA GCGCGGTGGA GTATCACGCC GAAGGCCTGC AAGGGTTGTT CAAGATTCCT GCAATGCACC TTTCCGTGGC CGAGGCTGCC GAACCCGCGA GCCTGGCTGC GCCCATCGCA CGTGCCAAGG ATATCTTCGC AGCGCAAACA GGGCTGAGTG TGCTGATCCT CGAAGACCAG CTGGTGATCG CGATTGGCCT GGAACAGATT CTCAACGATG CGCAGATCAA GGACGTGATC ACCGCCAGCT CCGAAGATGA AGCCTTGCGC TTGATTGCCA GTCGCACACC GGATGCCGCG ATATTGGATG TCAACCTGGG CACTGGCACA TCCATTTCTG TGGCCGATGA ACTGGTGCGT CGGCAGATTC CGTTCCTGTT CGCCACCGGC TATGGCGACA GCATCAGCAT TCCCGAGCAC CTGCAGCACG TGCCCGTCAC ACGCAAGCCC TATGACGCCA ATGCCATTCT GGCCAGCTTG AAACGGTTGC TCGATCTGGG CTGA
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Protein sequence | MTFNPQVNLT NCDREPIQTP GSIQPHGCLL ACDASATVVL RHSVNAPDVL GITGDINGQK LQAVLGDEVA HTLRNALART REASRPALSF SVRLPNGQAF DVAAHLFKGT AILEFEPAGA SIAEPIELAR TLIAQLREIE QTSKLFRDAA RFVRAVLGYD RVMIYQLGTD GAGKVVAEAR RSDLESFMGQ YFPASDIPQQ ARALYLRNPI RVISDAQFKT VAIEPVLDPS GEPLDLSYAH LRSVSPIHCE YLCNMGVGAS MSISVIVNGE LWGMIACHHY APRTLAMGQR VAAEMFGEFF SLHIETLRSR QKLEAAVQVH KALDSMLRDA NQTADIDSFF HARLPRLMSL IPCDGIGMSL QGRWSTVGLA PPKTAVPDLL RLADMVSEGR TWASNRLSMV LPSAQAYFTE VSGVLIIPMS QQPRDYLIFF RKEVVETLDW AGDPNKTYDS GLLGDRLTPR KSFAIWKETV HQQSLPWTEQ DRQFGDSIRT AIVEVVLYNS ELLASERTKA EVRQRILNEE LNHRVKNILS LIGALVAHPT SESQTLQDYV ATLKGRIQAL SLAHDQVVRG DGGGRLAKLL EAELSPYRTA AGVIELQGPN VTLDARAYSV MALVLHELAT NAAKYGALSR AGGKLAVSWA IDATNACAIS WRESGGPTVR PPTRNGFGSV LIDRSIPFDL GGTSAVEYHA EGLQGLFKIP AMHLSVAEAA EPASLAAPIA RAKDIFAAQT GLSVLILEDQ LVIAIGLEQI LNDAQIKDVI TASSEDEALR LIASRTPDAA ILDVNLGTGT SISVADELVR RQIPFLFATG YGDSISIPEH LQHVPVTRKP YDANAILASL KRLLDLG
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