| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2582 |
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| Symbol | |
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| ID | 5870371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2899563 |
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| End bp | 2900528 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547705 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001668817 |
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| Protein GI | 167033586 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.252196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.376143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAGAG ACCATATCGT CAAACCGCGC GCGACCGACA ACCCGGCATT CATGGGTATG
GCCGCCGCCG TGATCTTCGC CCTCGCCCTG CTCTACGGCG TGGGCGACGG TAGCCTGGCC
CGGCTGATGG GCCCGATCGT GCTCGACCTG CAGGCACCGC TGATGCGCAA CATCGCCGTG
GCCGGCACCC TGGCCGTGAC CCTGGTATTG AACGTGTTCA TCCTTGGCCG CTTTCCGTTG
CGGGCCCAGG TGATTACGGT CTGGTGCGAA CTGTTGCTGT TGTTCCTGCT GTTTTTCGAC
ACCTTCGACC TGTCCTACAG CTTCATCGCC ACCAAGGTCG GTTTCATGAT CACGCAAGGG
GTGTTCACCA CCGTCTACGT GTCCACCCTC TCGATCGCCA TCGCCTTCGT CCTGGCGCTG
CTGGGCGCAA CCGCACGGCT GTCGTCCAAC GGCTTCGCCA TCGCCATTGC CAGCTTCTAC
ACCTCGTTCT TTCGCGGCGT GCCGCTGCTG ATCCAGATCT ACCTGATCTA CCTTGGTATC
CCCCAGCTCG GCTATGTAGT CGGTGCCGTG CCGGCGGGGA TCCTGGCGTT GTCGCTGTGC
TACGGCGCCT ACATGACGGA AATCTTCCGC GCCGGTATCA GCAGCATCCC GCGCGGGCAA
TGGGAAGCTT CGCGGGCGAT CGGCCTGACC CCCTTCCAGG CCATGACCCG GGTAATCCTG
CCGCAGTCGA TGCGGTTGAT CATCCCGCCC ACCGGCAACC AGTTCATCTC CATGCTCAAG
GACAGCTCGC TGGTGTCGGT GATCGGTGTG TGGGAGCTGA TGTTCCTCGC CCGCACCCAG
GGCCGTGCGG AGTTTCGCCA CCTGGAAATG TTGATCACCG CCGCCGTCTT GTACTGGGTG
CTGTCGATCC TGCTCGAAGC CGTGCAGTCG CGCCTGGAAA AACGTTTCGA CCGCGCCCAT
CGCTGA
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| Protein sequence | MYRDHIVKPR ATDNPAFMGM AAAVIFALAL LYGVGDGSLA RLMGPIVLDL QAPLMRNIAV
AGTLAVTLVL NVFILGRFPL RAQVITVWCE LLLLFLLFFD TFDLSYSFIA TKVGFMITQG
VFTTVYVSTL SIAIAFVLAL LGATARLSSN GFAIAIASFY TSFFRGVPLL IQIYLIYLGI
PQLGYVVGAV PAGILALSLC YGAYMTEIFR AGISSIPRGQ WEASRAIGLT PFQAMTRVIL
PQSMRLIIPP TGNQFISMLK DSSLVSVIGV WELMFLARTQ GRAEFRHLEM LITAAVLYWV
LSILLEAVQS RLEKRFDRAH R
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