Gene PputGB1_2578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2578 
Symbol 
ID5870367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2895997 
End bp2896467 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content59% 
IMG OID641547701 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001668813 
Protein GI167033582 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.522022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.412871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCC TCCCACCCGG CGCGCTGTTC AAACTGACCG AAAAAGACCG GCAACTGTTG 
GCCTTGCTGC AGGCCAACGC CCGCGAGCCC ACCGCCTCGC TGGCGCGCAA GCTGGGCGTG
TCGCGTTCTG CGGTGCAGGA GCGCATCAAC CGCTTGGAAA ACGCCGGGGT CATCACCGGC
TACAGCGTGC GCATCGACCA GGACAAGCTG CAGCAAGTGA TCAACTGCTT CACCATGACT
TCATGCAGCA ACAAGAGCTA CACCGACGTG ATGACCACTT TGCGCAAGAT GGACTCGGTG
CAGGCGGTGT ATGCGGTGTC GGGTGAAATG GACTTCATCA TCCACCTGAC CACCCACACG
CTGGGGGAGC TGAATGCCGA GCTGACCCGC ATCAACATGA TCAAGGGCGT GACCCACACT
GCTTCGCACA TTGTCATGGA GACAAAGTTC AGCAAGAAGC TGACACTGTG A
 
Protein sequence
MDALPPGALF KLTEKDRQLL ALLQANAREP TASLARKLGV SRSAVQERIN RLENAGVITG 
YSVRIDQDKL QQVINCFTMT SCSNKSYTDV MTTLRKMDSV QAVYAVSGEM DFIIHLTTHT
LGELNAELTR INMIKGVTHT ASHIVMETKF SKKLTL