Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2578 |
Symbol | |
ID | 5870367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2895997 |
End bp | 2896467 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641547701 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001668813 |
Protein GI | 167033582 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.522022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.412871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCCC TCCCACCCGG CGCGCTGTTC AAACTGACCG AAAAAGACCG GCAACTGTTG GCCTTGCTGC AGGCCAACGC CCGCGAGCCC ACCGCCTCGC TGGCGCGCAA GCTGGGCGTG TCGCGTTCTG CGGTGCAGGA GCGCATCAAC CGCTTGGAAA ACGCCGGGGT CATCACCGGC TACAGCGTGC GCATCGACCA GGACAAGCTG CAGCAAGTGA TCAACTGCTT CACCATGACT TCATGCAGCA ACAAGAGCTA CACCGACGTG ATGACCACTT TGCGCAAGAT GGACTCGGTG CAGGCGGTGT ATGCGGTGTC GGGTGAAATG GACTTCATCA TCCACCTGAC CACCCACACG CTGGGGGAGC TGAATGCCGA GCTGACCCGC ATCAACATGA TCAAGGGCGT GACCCACACT GCTTCGCACA TTGTCATGGA GACAAAGTTC AGCAAGAAGC TGACACTGTG A
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Protein sequence | MDALPPGALF KLTEKDRQLL ALLQANAREP TASLARKLGV SRSAVQERIN RLENAGVITG YSVRIDQDKL QQVINCFTMT SCSNKSYTDV MTTLRKMDSV QAVYAVSGEM DFIIHLTTHT LGELNAELTR INMIKGVTHT ASHIVMETKF SKKLTL
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