| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2577 |
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| Symbol | |
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| ID | 5870366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2894706 |
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| End bp | 2895890 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547700 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001668812 |
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| Protein GI | 167033581 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.346803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.505288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTCC AGGAACTCCC CCCGCTCGCC AGTAAAAGCA CCGTCGCCAA GATGGAAGCC
GCCATGGCGC TGGGCAGCTT CGCCATCGGC ACCGGCGAAT TCGCCATCAT GGGCCTGATG
CCCGACATAG CCAGCAACCT GCAGTTGAGC GAGCCACAGG TGGGCCATGC CATCAGCGCC
TATGCATTGG GGGTGATGGT CGGCGCCCCT ACCCTGGCGA TTCTCGGTGC CAAACTGCTG
CGCAAGCACA TGCTGCTGCT GTTGATGCTG CTGTATGCCT TGGGCAACCT GGCCACGGCC
TTCGCCCCCT CGTTCGGCGG CCTGGTCGCC TTCCGCTTCA TCAGTGGCCT GCCCCACGGC
GCCTACTTCG GCATTGCGGC TGTGGTGGCC TCGAGCATGG TGGCCAAAGA TCAACGTGCA
GGTGCCGTCG CTCGGGTGAT GATGGGCCTG ACCCTGGCCA TGTTGCTCGG CAACCCGGTG
GCCACGTTCC TGGGCCAGTA TTTCGGCTGG CGTTCGGCCT TCGTGCTGGT CGGCGCGATT
GCCCTGTGCA CCATCGCCCT GGTCTGGCGT TTCGTGCCCC AGCGTCACGA CGAAGTACGC
AGCGACCCAC GCAAGGAACT GCAGGCCTTT ACCCTCCCGC AGGTATGGAT GGCGCTGGCC
ATCGCTTCCA TCGGCTTTGC CGGCATGTTC TGCGTGTTCA GCTACCTGGC GCCGACCATG
CTGCAAGTGA CCCAGGTCTC GCCGCAGTGG ATTCCGTTCG GCCTGGCGGC GTTCGGTGTT
GGCGGTATCG TCGGCAACAT CGCGGGCGGC AAACTGTTCG ACCGCCTGCA ATTCCGCGCG
GTGGGGCTGG TGTTGATGTG GTCGATTGCC GTGCTGCTGT TCTTCACCTT CGCCGCCCAG
GCACTGTGGA GCCTGCTGCT GGGCATCGGC CTGGTGGGTA CCATGATCGC CCTGGCCGCA
CCGCTGCAGA TCCGCCTGAT GGACATTGCT CATGAAGCGC CAAGCCTGGC CGCCGCGTCG
AACCATGCGG CGTTCAACCT GGCCAATGCA CTGGGGCCAT GGCTGGGCGG CATGGCGATC
ACTGCCGGCA TGGGCTGGAC CAGCACCGGG TTCATCGGCG CGGCGACGGC GCTGGTTGGC
CTGGGTATCT ACCTGTTGGC ACGGCGGATG AAAGGCGGCC ACTGA
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| Protein sequence | MSVQELPPLA SKSTVAKMEA AMALGSFAIG TGEFAIMGLM PDIASNLQLS EPQVGHAISA
YALGVMVGAP TLAILGAKLL RKHMLLLLML LYALGNLATA FAPSFGGLVA FRFISGLPHG
AYFGIAAVVA SSMVAKDQRA GAVARVMMGL TLAMLLGNPV ATFLGQYFGW RSAFVLVGAI
ALCTIALVWR FVPQRHDEVR SDPRKELQAF TLPQVWMALA IASIGFAGMF CVFSYLAPTM
LQVTQVSPQW IPFGLAAFGV GGIVGNIAGG KLFDRLQFRA VGLVLMWSIA VLLFFTFAAQ
ALWSLLLGIG LVGTMIALAA PLQIRLMDIA HEAPSLAAAS NHAAFNLANA LGPWLGGMAI
TAGMGWTSTG FIGAATALVG LGIYLLARRM KGGH
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