| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2576 |
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| Symbol | |
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| ID | 5870365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2893488 |
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| End bp | 2894693 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547699 |
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| Product | diaminopropionate ammonia-lyase |
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| Protein accession | YP_001668811 |
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| Protein GI | 167033580 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01747] diaminopropionate ammonia-lyase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.264217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.398915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTTT CCAACCCCAA GGCTGGCCGC CAGCCATACC CACAAGCGTT GCGAACTGTG
ATGAGCATTG CCAAGGCCGA AGAAAGCCGC CAGTGGCTGA CCGGTTGGTC GTGCCTGAAT
GCTGGGGCCA CGCCGCTGTA CGGTTTGCCT GACCTGGCCG CAGAACTGGG CATAGCCCAG
CTGTCGGTCA AGGATGAATC GGTGCGCTCG GTGCTGGGTA GCTTCAAGGC CCTTGGGGCG
CCGATCGCCT TGGTTCGGTT GATTCTGCGA ACCTTCCCCG AACAGCCTTT CGCGCCCCAT
GGGTTGCTGG AGGGCCATTA TGCGGATCTG CTGGCCGGCT TCACCGTCGT CAGTGCCACT
GATGGCAACC ATGGCAAAGG CCTGGCGGCA GCAGCACACA GCATAGGCTG TCGCTGCGTG
ATCGTGCTGC ACGCCAATGT CAGCATCGAG CGTGAGCAGG CGATTGCCGC CTACGGCGCA
CAGATCGTGC GGGTTGCCGG CAACTATGAC AAGTCGGTCG AGCACGCCGC CGTGCTGGCG
GCGAGCAATG GCTGGACCGT GGTTTCCGAT ACCTCGTATG AAGGCTATGA GGAGATCCCA
CGCGACGTGA TGCAAGGCTA CGCAACCATC GCCGCGGAAA TCATCGAAGC CACCGTCGGG
CAGCCACCGT TCACTCATGT GTTCCTGCAG GGCGGGGTAG GTGGCTTGGC AGCTGGCATC
GTCAGCTACC TGTGGGAACA CTTCGGCGAG CAGCGCCCGC TGTTTGTCAT GGTCGAACCC
GAGCAGGCCG ACTGCCTGTA CCAAAGTGCG ATGCTTGGCA AGCCGGCCAG GGCTGTTGGC
TCGGTGGACT CGGTCATGGC CGGCCTGGCC TGTGGCGAGA CATCGCCCCT GGCATGGCGC
TTTCTGGAGC CGAGCATCGA TTGTTTCATG ACCATCAGCG ACGACGAGGC CGTGGCCGCC
ATGCGCCGCC TGTCAGCCGG CAGCGTTCGT GACATTCCAT TGATCGCGGG TGAGTCAGGT
GTGGCCGGGT TGGCTGGGCT GGCCCGCCTG GTCAAGGACT CGGGCGCAGC CGCCAGCCTG
GGGGTCGGTA GAAATGCCCG TATTCTCTTC ATCAACACCG AAGGTGCCAC CGCCCCCGGC
GTTTACGCCG AGCTGTTGGG CGAAACGGCC GCCTCGGTGC TGGCGCGCCA GCAGTGCTGG
GCCTAA
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| Protein sequence | MFVSNPKAGR QPYPQALRTV MSIAKAEESR QWLTGWSCLN AGATPLYGLP DLAAELGIAQ
LSVKDESVRS VLGSFKALGA PIALVRLILR TFPEQPFAPH GLLEGHYADL LAGFTVVSAT
DGNHGKGLAA AAHSIGCRCV IVLHANVSIE REQAIAAYGA QIVRVAGNYD KSVEHAAVLA
ASNGWTVVSD TSYEGYEEIP RDVMQGYATI AAEIIEATVG QPPFTHVFLQ GGVGGLAAGI
VSYLWEHFGE QRPLFVMVEP EQADCLYQSA MLGKPARAVG SVDSVMAGLA CGETSPLAWR
FLEPSIDCFM TISDDEAVAA MRRLSAGSVR DIPLIAGESG VAGLAGLARL VKDSGAAASL
GVGRNARILF INTEGATAPG VYAELLGETA ASVLARQQCW A
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