| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2571 |
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| Symbol | |
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| ID | 5870360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2886981 |
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| End bp | 2889380 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641547694 |
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| Product | outer membrane protein assembly complex, YaeT protein |
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| Protein accession | YP_001668806 |
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| Protein GI | 167033575 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.227309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCACT CCGAATCCGC TTGTCTGGAA CCCCCGATGA ACTACCCGCG CCTGTTGCTC
TCCATCCTGT TGCTGAAAGC CACGCTGGCC CAGGCCTCCC CCTTCAGGAT CGCCGACATC
CGCGTCAACG GCCTGCAGCG GGTTTCCGCC GGCAGTGTGT TCGGTGCCCT GCCGCTGAAC
GTCGGCGACC AGGCCGATGA CCGCCGCCTG GTGGACTCGA CCCGTTCCCT GTTCAAGACC
GGGTTCTTCC AGGACATCCA GTTGAACCGC GATGGCAATG TGCTGATCAT CAACGTGGTC
GAGCGCCCGT CGGTGTCGAG CATCGAGATC GAAGGCAACA AGGCGATCAG CACCGAAGAC
CTGATGAAGG GCCTGAAGCA ATCGGGCCTG GCCGAGGGCG AAATCTTCCA GCGTGCCACC
CTCGAAGGTG TGCGTAACGA GCTGCAGCGC CAGTACGTGG CCCAGGGCCG CTACTCGGCC
GAGGTCGACG CCGAAGTGGT GCCGCAGCCG CGCAACCGTG TGGCGCTGAA GATCAAGATC
AACGAAGGCA CCGTCGCCGC CATCCAGCAC ATCAACATCG TTGGCAACAA CGTGTTCGAT
GATGAAACCC TGGGGCAGCT GTTCGAGCTG AAGACCACCA ACTGGCTGTC GTTCTTCAAG
AACGATGACA AGTACGCCCG TGAAAAACTC TCCGGTGACC TGGAGCGCCT GCGTTCCTAC
TACCTGGACC GCGGCTACAT CAACATGGAC ATCGCCTCCA CCCAGGTGTC CATCACGCCG
GACAAGAAGC ACGTCTACAT CACCGTCAAC ATCAACGAAG GCGAGAAGTA CACCGTTCGC
GACGTGAAGC TGTCCGGTGA CCTCAAGGTG CCGGAAGACC AGGTCAAGTC GCTGCTGCTG
GTGCAGCCAG GCCAGGTGTT CTCGCGCAAG GTGATGACCA CCACCTCCGA GCTGATCACC
CGCCGCCTGG GTAACGAAGG CTACACCTTC GCCAACGTCA ACGGCGTGCC ACAGCCGAAC
GACCAGGACC ACACGGTCGA CATCATGTTC GTGGTCGACC CGGGCAAGCG TGCCTACGTC
AACCGCATCA ACTACCGCGG CAACACCAAG ACCGAAGACG AAGTGCTGCG CCGCGAAATG
CGCCAGATGG AAGGCGGGTG GGCTTCGACC TACCTGATCG ACCAGTCCAA GACCCGTCTG
GAGCGCCTGG GCTTCTTCAA GGAAGTCAAC GTCGAGACCC CACCGGTGCC GGGCACCGAC
GACCAGGTCG ACGTCAACTA CAGCGTCGAA GAGCAGGCCT CCGGCTCGAT CACCGCCAGC
GTCGGTTTCG CCCAGAGCGC CGGCCTGATC CTCGGTGGTT CGATCAGCCA GAGCAACTTC
CTCGGTACCG GTAACAAGGT GGCCATCGGC CTGACGCGCA GCGAATACCA GACCAAGTAC
AACTTCGGTT TCACCGACCC CTACTTCACC GCCGACGGGG TCAGCCTGGG CTACAACCTG
TTCTACAACA GCACCGACTA CAGCGATTAC TACGACGATG GCGTTTCGTA TTATGCGATC
AACAGCTACG GCGCCGGGGT CAGCTTTGGC TACCCGATCA GCGAAACCTC GCGCCTGAGC
TACGGCCTCA CCCTGCAGCA CGACGACCTT TCGCCGGGCA CCTACAGCGC CGACGAGATC
TACGACTTCA TTTCCCGCGA GGGCAAGAGT TTCAACAACC TCAAGGCCTC GATCGGCTGG
TCGGAATCCA CCCTCAATAA AGGCGTACTG GCCACCCGTG GCCACTCGCA GAGCCTGACG
CTGATGGCCA CCACCCCAGG CAGCGACCTG TCATTCTACA AGCTGGACTA CAACGGCCAG
GCCTACTTGC CGGTGACCAA CAACACCGCA CTGCGCCTGC ACACCAGCCT GGGCTATGGC
AATGGCTACG GCTCCACCGA CGGCTTGCCG TTCTATGAAA GCTACACCGC AGGTGGCCAG
GGTTCGGTGC GTGGGTTCAA GGACGGCACC CTCGGCCCAC GCAACACCCC GGCCACCGGT
GCTTATGCAA GGTCAGGCCA GGCTTACTAC TCCGACCGAG ACACCGATGT GCTGGGGGGC
AATATCCTGA TCACCGGCGG TGCCGAGTAC ATTTTCCCGT TGCCGTTCGT GAAGGACCAG
AGCCAGCTGC GCAGCTCATT GTTCGTCGAT GCGGGCAATG TGTATGCCGA CACCTGCTAC
CTGTCCACCA CCCAAGGCTG TGGCAGCGTC GACCTGGCGC AGATGGCCGT GTCGCTGGGG
GTTGGCGTGA CCTGGTACAG CCCGATGGGG CCGCTGAGCT TCAGCCTGGC GGCGCCGTTG
AAAAAGCCGG ATAACGCCGA GACCCAGATT TTCCAGTTCT CCCTGGGGCA GACATTCTGA
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| Protein sequence | MLHSESACLE PPMNYPRLLL SILLLKATLA QASPFRIADI RVNGLQRVSA GSVFGALPLN
VGDQADDRRL VDSTRSLFKT GFFQDIQLNR DGNVLIINVV ERPSVSSIEI EGNKAISTED
LMKGLKQSGL AEGEIFQRAT LEGVRNELQR QYVAQGRYSA EVDAEVVPQP RNRVALKIKI
NEGTVAAIQH INIVGNNVFD DETLGQLFEL KTTNWLSFFK NDDKYAREKL SGDLERLRSY
YLDRGYINMD IASTQVSITP DKKHVYITVN INEGEKYTVR DVKLSGDLKV PEDQVKSLLL
VQPGQVFSRK VMTTTSELIT RRLGNEGYTF ANVNGVPQPN DQDHTVDIMF VVDPGKRAYV
NRINYRGNTK TEDEVLRREM RQMEGGWAST YLIDQSKTRL ERLGFFKEVN VETPPVPGTD
DQVDVNYSVE EQASGSITAS VGFAQSAGLI LGGSISQSNF LGTGNKVAIG LTRSEYQTKY
NFGFTDPYFT ADGVSLGYNL FYNSTDYSDY YDDGVSYYAI NSYGAGVSFG YPISETSRLS
YGLTLQHDDL SPGTYSADEI YDFISREGKS FNNLKASIGW SESTLNKGVL ATRGHSQSLT
LMATTPGSDL SFYKLDYNGQ AYLPVTNNTA LRLHTSLGYG NGYGSTDGLP FYESYTAGGQ
GSVRGFKDGT LGPRNTPATG AYARSGQAYY SDRDTDVLGG NILITGGAEY IFPLPFVKDQ
SQLRSSLFVD AGNVYADTCY LSTTQGCGSV DLAQMAVSLG VGVTWYSPMG PLSFSLAAPL
KKPDNAETQI FQFSLGQTF
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