Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2569 |
Symbol | |
ID | 5870358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2885470 |
End bp | 2886435 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641547692 |
Product | deoxyribonuclease I |
Protein accession | YP_001668804 |
Protein GI | 167033573 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0107726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.160045 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAC TGCTTTACGC CGTAACCTTA TTGTTTTCCT TTACCCTGCC CGCCCTGGCC AACCCGCCGG CAACCTTCAC CGAAGCCAAG GTGGTGGCCA AGCAGAAGGT GTACCTGGAC CAAGCCAGCA GTGCCATGGG CGACCTGTAC TGCGGTTGCA AGTGGACCTG GGTGGGCAAG TCCGGCGGGC GTATCGATGC CGCCTCGTGC GGTTACCAGA CGCGCAAGCA GCAGAACCGC GCCGAGCGTA CCGAGTGGGA GCACATCGTG CCCGCCTACA CCTTCGGCAA CCAGCGCCAG TGCTGGAAGA ACGGTGGCCG CGAACATTGC GTGGACAACG ACCCGGTATT CCGCGCCATG GAGGCCGACC TGTTCAACCT GTACCCGGCC GTGGGCGAGG TCAACGGTGA CCGCAGCAAC TTCAATTACG GCATGGTGGC TGGCAATGCA GGTGAATACG GCCAATGCAG CACCAAGGTC GATTTCGTCC AGCGCGCCGC CGAACCGCGT GATGAAGTCA AAGGCCTGGT GGCCCGCACC ACGTTCTACA TGTTCGACCG CTACCAGCTG AGCATGTCGC GCCAGCAGCA ACAGCTGCTG ATGGCCTGGG ACAAGCAACA CCCGGTGTCG GCCTGGGAGA AAGAACGCGA CCGGCGTATT GCCGCGATCA TGGGGCATGC CAACCCGTTC GTAAGCGGGG AACGCAAGTG GACGGCCGAC TACAAGCCGG TTGGCAGCGG CGTGGTGCAA GCGGTGCCAG TGAAAGCCGC CAAGGCAGAG GCCAAACCGA GCCTGGCCAG CGCCGAGTCG GTCGGGGCTG TGCTAGGCAA CCGCAACAGC CATGTCTATC ACCTGTCGGT TGGCTGCCCG GGCTACAACC AGGTGGCGGC GAAGAACCAG GTTACGTTCG CCACCGAAGG TGAAGCGCAG GCAGCGGGCT ACCGCAAGGC GGGTAACTGC CGATGA
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Protein sequence | MKSLLYAVTL LFSFTLPALA NPPATFTEAK VVAKQKVYLD QASSAMGDLY CGCKWTWVGK SGGRIDAASC GYQTRKQQNR AERTEWEHIV PAYTFGNQRQ CWKNGGREHC VDNDPVFRAM EADLFNLYPA VGEVNGDRSN FNYGMVAGNA GEYGQCSTKV DFVQRAAEPR DEVKGLVART TFYMFDRYQL SMSRQQQQLL MAWDKQHPVS AWEKERDRRI AAIMGHANPF VSGERKWTAD YKPVGSGVVQ AVPVKAAKAE AKPSLASAES VGAVLGNRNS HVYHLSVGCP GYNQVAAKNQ VTFATEGEAQ AAGYRKAGNC R
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