| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2562 |
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| Symbol | |
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| ID | 5870351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2877013 |
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| End bp | 2878797 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641547685 |
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| Product | gluconate 2-dehydrogenase acceptor subunit |
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| Protein accession | YP_001668797 |
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| Protein GI | 167033566 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0936094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACTG TGTTGAACAA AGTGGATGCC GTGATCGTCG GCTTCGGCTG GGCCGGCGCG
ATCATGGCCA AGGAGCTGAC TGAAGCGGGT CTGCACGTGG TAGCCCTGGA GCGTGGGCCT
ATGCAGGACA CCTACCCGGA AGGCAGCTAC CCGCAGGTGA TCGATGAGCT GACCTACAGC
GTGCGCAAGA AGCTGTTCGT CGATGTATCG AAAGAAACCG TCACTGTCCG CCATAGCGTG
AACGATGTGG CGCTGCCCAA CCGCCAGCTC GGTGCCTTCC TGCCAGGTAA GGGCGTTGGC
GGCGCAGGCC TGCACTGGTC GGGCGTGCAC TTTCGGGTCG ACCCGGTCGA GTTGCGCCTG
CGCAGCCACT ACGAAGAGCG CTACGGGCGC ACGTTCATCC CCGAGGGCAT GACCATCCAG
GACTTCGGCG TCAGTTACGA AGAACTGGAG CCGTATTTCG ACTTTGCCGA AAAGGTTTTC
GGCACTTCAG GCCAGGCGTG GACCGTCAAA GGCAAGGTGG TCGGTGAAGG GAAGGGTGGC
AACCCCTATG CACCGGACCG TTCCAACCCG TTCCCACTGC CTGCGCAGAA GAACGTTGTA
TCGGCCAGGT TGTTCGAAAA GGCCGCCACG GGCCTGGGCT ATAAACCCTA CAACTTGCCC
TCGGCAAACA CCTCCGGCCC CTACACCAAC CCCTACGGTG CGCAAATGGG GCCGTGCAAC
TTCTGTGGTT TTTGCAGCGG CTACGTGTGC TACATGTACT CCAAGGCCTC GCCCAACGTG
AACATTCTGC CGGCGCTGCG CCAGGTGCCC AACTTCGAGT TGCGGCCCAA TGCCCACGTG
CTGCGGGTGA ACCTGGACGA TAGCAAGCGC AAGGCTACCG GTGTGACCTA TATCGATGCC
CAGGGGCGCG AGGTAGAGCA GCCAGCGGAG CTGGTGATCC TGGCGGCGTT CCAGTTCAAC
AACGTTCGCC TGATGCTGCT TTCCGGCATT GGCAAGCCTT ACGACCCGGT GAAGAACGAA
GGTGTGGTCG GGCGTAACTT CGCGTACCAG AACATGGGGA CGGTCAAGGC GTTCTTCGAC
AAGAGCACCT ACACCAACAA CTTTATCGGC GCGGGTGGCA ATGGCATTGC CATTGACGAC
TTCAATGCCG ACAACTTCGA CCATGGCCCG CACGGCTTTG TCGGCGGCTC GCCGATGTGG
GTGAACCAGG CCGGCAGCCG GCCGATTGCC GGCATCTCCA ACCCGCCGGG CACGCCGGCC
TGGGGCAGTG CCTGGAAGAA AGCCACAGCG GACTACTACA CCCACCAGGT GTCGATGGAC
GCCCACGGCG CTCACCAGTC CTACCGTGGC AACTACCTGG ACCTCGACCC CACGTACCGC
GACGCCTACG GCCAGCCGCT GTTGCGCATG ACCTTCGACT GGCAGGAGAA CGACATCAAG
ATGAACCAGT TCATGGTCGG CAAGCTGAGC AAGATCGCCC AGGCGATGAA CCCCAAGGCC
ATTGCCGTGC TGGGCAAGCA GGTGAAGGAT CACTTCAACA CCGCCAGTTA CCAGACCACC
CACCTGAATG GCGGCGCGAT CATGGGCACC GACCCGAAAA CCAGTGCACT GAACCGCTAC
CTGCAAAGCT GGGACGTGCA CAACGTGTTC GTCCCGGGCG CTTCGGCGTT CCCGCAGGGG
TTGGGGTACA ACCCGACCGG GCTGGTGGCC GCGCTGACCT ATTGGTCAGC CCGCGCCATC
CGCGAGCAGT ACCTGAAAAA CCCCGGCCCG CTGGTTCAGG CCTGA
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| Protein sequence | MATVLNKVDA VIVGFGWAGA IMAKELTEAG LHVVALERGP MQDTYPEGSY PQVIDELTYS
VRKKLFVDVS KETVTVRHSV NDVALPNRQL GAFLPGKGVG GAGLHWSGVH FRVDPVELRL
RSHYEERYGR TFIPEGMTIQ DFGVSYEELE PYFDFAEKVF GTSGQAWTVK GKVVGEGKGG
NPYAPDRSNP FPLPAQKNVV SARLFEKAAT GLGYKPYNLP SANTSGPYTN PYGAQMGPCN
FCGFCSGYVC YMYSKASPNV NILPALRQVP NFELRPNAHV LRVNLDDSKR KATGVTYIDA
QGREVEQPAE LVILAAFQFN NVRLMLLSGI GKPYDPVKNE GVVGRNFAYQ NMGTVKAFFD
KSTYTNNFIG AGGNGIAIDD FNADNFDHGP HGFVGGSPMW VNQAGSRPIA GISNPPGTPA
WGSAWKKATA DYYTHQVSMD AHGAHQSYRG NYLDLDPTYR DAYGQPLLRM TFDWQENDIK
MNQFMVGKLS KIAQAMNPKA IAVLGKQVKD HFNTASYQTT HLNGGAIMGT DPKTSALNRY
LQSWDVHNVF VPGASAFPQG LGYNPTGLVA ALTYWSARAI REQYLKNPGP LVQA
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