Gene PputGB1_2553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2553 
Symbol 
ID5870342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2864868 
End bp2866196 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content66% 
IMG OID641547676 
Producthypothetical protein 
Protein accessionYP_001668788 
Protein GI167033557 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0475341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGAC CGATACCCCA CCCGCTGGCA GTGGCGATTT TCGCCGGCAT GCTCCAGCTT 
CCGGCGCAGG CTGCACTGAA TGCTGTCGAT CCAGGCGCCT ACGTCCCCGC CAACGGCGGC
TTCCCTGCCT GGTACCAGGA CAGCCACGGT CGTACCCTCG ACCTGTGTCT GACCAAAGCC
GTCAGCTCTC GGGTCGCCGG CGCACCCGGC GCACCGTCGT ACATGTGCAC GTTGCTGCCC
ACGCCCGGTG TGTTCGACGA TACCCAACCC ATCGTCTTCC CCACCAACTT CCCTGACGAG
GCATTCTGGT TCACTGCCGA CGCCGCCATC GCCGACGCCG CCCGCGGCAT CAACCTCAGC
TACGGCACGG CAATCGAAGC GGCATTCGCC GCCGAAGAGC CGGTGGAGGG TGACCAGGTC
AGCTTCGCCC GGGTGCGTAT CCGGGTTGAT GTCCCTACCG CCGGCACCTA CGTGGTCACC
CACCCCTACG GCGTTGAAGT GTTCGATGTC CCCGCCGCAG GGCGCCGTGC GATCAACATG
ACCCGCGACA TCGGCATTGC CGGCGCAGGC GACTTCACCG GTGCGCTGAA AGGCGATGTC
GGGCCGTTCC TGCGCAGTGT CAACGGCCCC TACACCGAAG GTAACGAACG CTTCATCGGC
GACCCGAACC TGGAAGAACG GGTAACCGGC AGCCCGTTCA ACACCAACTT CGTCCGCATC
GAAGGCCCTG GCGGCATCGA CCTGCGTACC GAACTTTTCG CAATCTCCGG CAAGCTCTCG
ACTGTCGCCC TGCCTACCCC GCTGATGCCA CAGCGCAGCA CCTACTCGCG GCATACCGAG
AATGGCGACC TGCGTGCCCA GCAGGACATC TTCGTGATGG CCCCGCCGCC GCCTGCCAGC
GTAACCCTGA CCAGCCAGAC CCCCAACCTG AGCCTCACCG AGGCCAACGG CACCGGCGCC
TGGTACGCCC AATCGGCGCT GAACCCGGCG GCCGGCACCC TCCTCACACT CACCGCCGAC
AACAGCGTGG CGATTCCGAC CAGCAGCCTG ACCACCCACA ACGTGCCGCT GACCGACCTG
GTCACCATCA CCCAAGCCCA GTACCGGCTG TCCACCGGCG AGCTGACCTT GGTGGCCAGC
ACCAGCGACG AAACCACCCC ACCCGTGCTC ACCGCCCATA CCGGCAACGG TACGTTGATC
GGCAACCTTG GCGGCAACGG CGCGGTGAAG ACGTTGAGCA TGACCGTCTC ACCCATCCCG
CCGGCCAAGG TGCAGGTCAC CAGCGCCAAT GGGGGTAGCG ATACCGAAGA CGTGGTGCTG
GTGCCATGA
 
Protein sequence
MHRPIPHPLA VAIFAGMLQL PAQAALNAVD PGAYVPANGG FPAWYQDSHG RTLDLCLTKA 
VSSRVAGAPG APSYMCTLLP TPGVFDDTQP IVFPTNFPDE AFWFTADAAI ADAARGINLS
YGTAIEAAFA AEEPVEGDQV SFARVRIRVD VPTAGTYVVT HPYGVEVFDV PAAGRRAINM
TRDIGIAGAG DFTGALKGDV GPFLRSVNGP YTEGNERFIG DPNLEERVTG SPFNTNFVRI
EGPGGIDLRT ELFAISGKLS TVALPTPLMP QRSTYSRHTE NGDLRAQQDI FVMAPPPPAS
VTLTSQTPNL SLTEANGTGA WYAQSALNPA AGTLLTLTAD NSVAIPTSSL TTHNVPLTDL
VTITQAQYRL STGELTLVAS TSDETTPPVL TAHTGNGTLI GNLGGNGAVK TLSMTVSPIP
PAKVQVTSAN GGSDTEDVVL VP