Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2553 |
Symbol | |
ID | 5870342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2864868 |
End bp | 2866196 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641547676 |
Product | hypothetical protein |
Protein accession | YP_001668788 |
Protein GI | 167033557 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0475341 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCGAC CGATACCCCA CCCGCTGGCA GTGGCGATTT TCGCCGGCAT GCTCCAGCTT CCGGCGCAGG CTGCACTGAA TGCTGTCGAT CCAGGCGCCT ACGTCCCCGC CAACGGCGGC TTCCCTGCCT GGTACCAGGA CAGCCACGGT CGTACCCTCG ACCTGTGTCT GACCAAAGCC GTCAGCTCTC GGGTCGCCGG CGCACCCGGC GCACCGTCGT ACATGTGCAC GTTGCTGCCC ACGCCCGGTG TGTTCGACGA TACCCAACCC ATCGTCTTCC CCACCAACTT CCCTGACGAG GCATTCTGGT TCACTGCCGA CGCCGCCATC GCCGACGCCG CCCGCGGCAT CAACCTCAGC TACGGCACGG CAATCGAAGC GGCATTCGCC GCCGAAGAGC CGGTGGAGGG TGACCAGGTC AGCTTCGCCC GGGTGCGTAT CCGGGTTGAT GTCCCTACCG CCGGCACCTA CGTGGTCACC CACCCCTACG GCGTTGAAGT GTTCGATGTC CCCGCCGCAG GGCGCCGTGC GATCAACATG ACCCGCGACA TCGGCATTGC CGGCGCAGGC GACTTCACCG GTGCGCTGAA AGGCGATGTC GGGCCGTTCC TGCGCAGTGT CAACGGCCCC TACACCGAAG GTAACGAACG CTTCATCGGC GACCCGAACC TGGAAGAACG GGTAACCGGC AGCCCGTTCA ACACCAACTT CGTCCGCATC GAAGGCCCTG GCGGCATCGA CCTGCGTACC GAACTTTTCG CAATCTCCGG CAAGCTCTCG ACTGTCGCCC TGCCTACCCC GCTGATGCCA CAGCGCAGCA CCTACTCGCG GCATACCGAG AATGGCGACC TGCGTGCCCA GCAGGACATC TTCGTGATGG CCCCGCCGCC GCCTGCCAGC GTAACCCTGA CCAGCCAGAC CCCCAACCTG AGCCTCACCG AGGCCAACGG CACCGGCGCC TGGTACGCCC AATCGGCGCT GAACCCGGCG GCCGGCACCC TCCTCACACT CACCGCCGAC AACAGCGTGG CGATTCCGAC CAGCAGCCTG ACCACCCACA ACGTGCCGCT GACCGACCTG GTCACCATCA CCCAAGCCCA GTACCGGCTG TCCACCGGCG AGCTGACCTT GGTGGCCAGC ACCAGCGACG AAACCACCCC ACCCGTGCTC ACCGCCCATA CCGGCAACGG TACGTTGATC GGCAACCTTG GCGGCAACGG CGCGGTGAAG ACGTTGAGCA TGACCGTCTC ACCCATCCCG CCGGCCAAGG TGCAGGTCAC CAGCGCCAAT GGGGGTAGCG ATACCGAAGA CGTGGTGCTG GTGCCATGA
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Protein sequence | MHRPIPHPLA VAIFAGMLQL PAQAALNAVD PGAYVPANGG FPAWYQDSHG RTLDLCLTKA VSSRVAGAPG APSYMCTLLP TPGVFDDTQP IVFPTNFPDE AFWFTADAAI ADAARGINLS YGTAIEAAFA AEEPVEGDQV SFARVRIRVD VPTAGTYVVT HPYGVEVFDV PAAGRRAINM TRDIGIAGAG DFTGALKGDV GPFLRSVNGP YTEGNERFIG DPNLEERVTG SPFNTNFVRI EGPGGIDLRT ELFAISGKLS TVALPTPLMP QRSTYSRHTE NGDLRAQQDI FVMAPPPPAS VTLTSQTPNL SLTEANGTGA WYAQSALNPA AGTLLTLTAD NSVAIPTSSL TTHNVPLTDL VTITQAQYRL STGELTLVAS TSDETTPPVL TAHTGNGTLI GNLGGNGAVK TLSMTVSPIP PAKVQVTSAN GGSDTEDVVL VP
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