| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2544 |
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| Symbol | |
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| ID | 5870333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2856287 |
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| End bp | 2857174 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547667 |
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| Product | pirin domain-containing protein |
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| Protein accession | YP_001668779 |
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| Protein GI | 167033548 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0054252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAAAGA TTCTGGGTAT CCACCGCAGC CCCCACGCCC ATTGGGTGGG TGATGGTTTT
CCGGTGCGCA GCCTGTTCAC CTACGACAAC CTGGCCAGCC GGATCAGCCC GTTCCTGCTG
CTGGACTACG CCGGCCCGCA TGATTTCACC CCCACCACTG CACGGCGTGG GGTGGGTCAG
CACCCGCACC GTGGTTTCGA GACCGTGACC ATCGTCTACC AGGGTGAACT GGAGCACCGT
GATTCCACCG GTGCTGGCGG CTTGATCGGC CCAGGTGACG TACAGTGGAT GACGGCTGCC
AATGGCATCA TCCATGAAGA GTTCCATTCT CCGGCCTTCG CCCACAGTGG CGGCACGCTG
GAAATGGTCC AGCTGTGGGT CAACCTGCCG GCGCGGGACA AACGCGCGGC GGCTGGGTAC
CAGACCCTGC TGGCCAGCGA CATCCCGGTG GTCACGCTGG ACGGTGACGC TGGCAGCTTG
CGGGTGGTTG CGGGCGACTA CCGTGGGCAC CTGGGGCCAG CTCGGACCTT TACCGCGATG
GATGTGTGGG ACCTGCGGTT GAATGCTGGC GCGGCCTTGC AACTGCCGGT CGCTGCCGGC
CGCAACGCGG CGCTGGTGGT GCTGCGTGGT AACGTGCGAA TCAACGGCGA GCGCGAGGCA
GGCCCGGCCA GCCTGGTGTT GCTTGACCGG GAGGCTGAGG ATGTCAGTGT CGAGGCGTTG
GAAGGTGCCA GCGTGCTACT GCTCAGCGGT GAGCCGATCG ATGAGCCGAT CGTCGGCTAT
GGCCCGTTCG TGATGAACAG CCAGGCGGAG ATCGCCGAAT CTTTCGATGA CTTCCATGCC
GGGCGGTTTG GGCAGATGCA GGATGAGCGG GAAGGGGCTC GGCACTGA
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| Protein sequence | MKKILGIHRS PHAHWVGDGF PVRSLFTYDN LASRISPFLL LDYAGPHDFT PTTARRGVGQ
HPHRGFETVT IVYQGELEHR DSTGAGGLIG PGDVQWMTAA NGIIHEEFHS PAFAHSGGTL
EMVQLWVNLP ARDKRAAAGY QTLLASDIPV VTLDGDAGSL RVVAGDYRGH LGPARTFTAM
DVWDLRLNAG AALQLPVAAG RNAALVVLRG NVRINGEREA GPASLVLLDR EAEDVSVEAL
EGASVLLLSG EPIDEPIVGY GPFVMNSQAE IAESFDDFHA GRFGQMQDER EGARH
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