Gene PputGB1_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2540 
Symbol 
ID5870329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2853005 
End bp2853484 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content61% 
IMG OID641547663 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001668775 
Protein GI167033544 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00777279 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCTCA TCATTCGCCC TGCCGTTCGC ACCGATGCCG AGCAGATCCT GGCCTTCATC 
ACTGAACTTG CCGATTACGA GCGCGCACGC CACGAGGTGG TCGCCACCTT GGCGGATATC
GAGCACAGCC TGTTCGATGA GGGCAGCACA GTGCACAGCC TGATTTGCGA GCGTGATGGC
CGGGCGATTG GTTTTGCCGT GTATTTCTAC AGCTACTCGA CCTGGCTCGG GCGCAATGGC
ATTTACCTGG AAGACTTGTA TGTGACACCC GAGCAACGTG GCGATGGCGC CGGGCGGCAA
CTGCTTCAGC ACATTGCCCG CGAGGCGGTG GCGAACCAGT GCGGGCGCCT GGAATGGAGC
GTGCTGGACT GGAACGAGCC TGCGATCGGT TTCTATCAGA AGCTGGGGGC CGAGGCGCAG
GATGAGTGGG TGCGCTACCG CTTGGATGGG GAGAAGCTGG CGGCATTCGC CCAAGGTTGA
 
Protein sequence
MSLIIRPAVR TDAEQILAFI TELADYERAR HEVVATLADI EHSLFDEGST VHSLICERDG 
RAIGFAVYFY SYSTWLGRNG IYLEDLYVTP EQRGDGAGRQ LLQHIAREAV ANQCGRLEWS
VLDWNEPAIG FYQKLGAEAQ DEWVRYRLDG EKLAAFAQG