| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2537 |
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| Symbol | |
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| ID | 5870326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2849731 |
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| End bp | 2850675 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641547660 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001668772 |
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| Protein GI | 167033541 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.415686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00909604 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCACT CGATCATCGC CAGCCAGCTG GACGCCCAGG CTAACCAGTA CCTGCGCGAT
CACTTGCCTG ACCACGAGGT GGTCGATATC GCACCCACCC AGCTGCAGCT GGACATCCCT
GCCGACGTCT TCATCCTGCG CCCGGTCAAT GTACGCGGTA ACCGAGTGGA TTCCCCGCCC
GCCGGCTGGC CGTGGCAATT GCGCTGGGTG CAGGTGGTGT CCTCGGGCAT CGACTTCTAC
CCCGACTGGG TGTTCCAGGG CCCGCCGGTC ACCAGTGGCC GCGGCGCCAA TGCCGAGCAG
GTGGCCGAGT TTGCCTTGGC TCTGGTGCTC GCTGCCGCCA AGCAGCTACC GGGCCTGTGG
GTCAAAGACG CCGACTGGCG CCTGACCCCG CTGGCCCCGG TACGTGGCCG TACCCTGGGC
ATATTCGGCT TCGGCAGCAT CGGCCAGAGC CTGGCGCGCA AGGCAAATGC CCTGGGCATG
CAGGTACTGG CGCTGAATCG CCCAGGCCAA CCCATTGCCG AGGTGCCGGG CGTACAGCGC
GTCGACAACC TGCAACAGCT GTTTGCCGGC AGCGATCACC TGGTCATCGC CGCCCCGCTC
ACCCCTGCCA CCCGTGGCCT GATCGACCAC CAGGTACTGG CCCAGGCCAA GCCCGGCCTG
CACCTGATCA ACATCGCCCG TGGCGGGCTG CTGAACCAGC AAGCCCTGCT CGATGCCCTG
GACAGTGGCC TGATCGGCCG CGCCAGCCTG GATGTCACCG AACCGGAGCC GCTACCGACG
GGGCACCCGC TGTACCAGCA CCCGCGAGTA TTCCTGTCGC CGCATACCTC GGCGATTTCC
GAGGACGGCT ACCCGGCCTT GCTCGACGCA TTTCTCGACA ACTTCGCCCG CTACCGCGAA
CAGGCACCGC TGCACAACCT GGTCGATACC CAGCGCGGCT ACTGA
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| Protein sequence | MSHSIIASQL DAQANQYLRD HLPDHEVVDI APTQLQLDIP ADVFILRPVN VRGNRVDSPP
AGWPWQLRWV QVVSSGIDFY PDWVFQGPPV TSGRGANAEQ VAEFALALVL AAAKQLPGLW
VKDADWRLTP LAPVRGRTLG IFGFGSIGQS LARKANALGM QVLALNRPGQ PIAEVPGVQR
VDNLQQLFAG SDHLVIAAPL TPATRGLIDH QVLAQAKPGL HLINIARGGL LNQQALLDAL
DSGLIGRASL DVTEPEPLPT GHPLYQHPRV FLSPHTSAIS EDGYPALLDA FLDNFARYRE
QAPLHNLVDT QRGY
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