| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2532 |
|---|
| Symbol | |
|---|
| ID | 5870321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2845043 |
|---|
| End bp | 2845729 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641547655 |
|---|
| Product | cobalt transporter, subunit CbtA |
|---|
| Protein accession | YP_001668767 |
|---|
| Protein GI | 167033536 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5446] Predicted integral membrane protein |
|---|
| TIGRFAM ID | [TIGR02458] cobalt transporter subunit CbtA (proposed) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.00862817 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCACGC GCATTGCCCG TACTGCGGGT TTCAGCGGGT TGCTTGCGGC CCTGTTGCTG
ACCTTGCTGC AAAGCTTTTG GGTCGCCCCG CTGATTCTCG AAGCGGAAAC CTACGAGTCC
TCGGCCCCGG CCGCACAACA CGAACATGGC GGCAATGAGG GCGCTCATGA ACACAGCGCC
GAAGCCTGGT CACCAGAAGA CGGCTGGCAG CGCGTGCTGT CCACCACCGG TGGCAACCTG
GTGGTGGCGG TGGGCTTTGC CCTGATCCTC GCCGCACTGT ATGGCCTGCG CGAGCCGAAG
CGCGTCAGCA CTGGCGCCTT GTGGGGCCTG GCCGGTTTCG CCGTGTTCTG TCTGGCCCCA
ACGTTGGGGT TGCCACCGGA ACTGCCCGGC ACTGCTGCCG CCGACCTGGG GCAACGCCAG
GCCTGGTGGA TTGGCACGGC CAGCGCCACC GCCCTTGGCC TGGCCTTGCT GGTGTTCGCC
CGCCACTGGC TGCTGAAGGC GCTGGGCGCC GTGCTGCTGG TTATCCCCCA TGTGATCGGT
GCGCCACAGC CTGAAGTCCA TGAAAGCCTG GCCCCCGAAG CACTGGAGAC GCAGTTCAAG
ATGGCCTCCT GGCTGACCAA CGCTGCCTTC TGGGTGGCGT TGGGCCTGCT CAGTGCGTGG
CTGTTCCGCC GCTCCAGCGA GGCCTGA
|
|---|
| Protein sequence | MITRIARTAG FSGLLAALLL TLLQSFWVAP LILEAETYES SAPAAQHEHG GNEGAHEHSA
EAWSPEDGWQ RVLSTTGGNL VVAVGFALIL AALYGLREPK RVSTGALWGL AGFAVFCLAP
TLGLPPELPG TAAADLGQRQ AWWIGTASAT ALGLALLVFA RHWLLKALGA VLLVIPHVIG
APQPEVHESL APEALETQFK MASWLTNAAF WVALGLLSAW LFRRSSEA
|
|---|
| |