Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2531 |
Symbol | |
ID | 5870320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2844657 |
End bp | 2845043 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641547654 |
Product | cobalamin biosynthesis protein CobE |
Protein accession | YP_001668766 |
Protein GI | 167033535 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2073] Cobalamin biosynthesis protein CbiG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.573883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00728118 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGGCTT TCTACGCTGG CTTGGGCTGC CGCCGGGGTT GCCCGGCGGA TACCCTGCAA ACCCTGCTGC ACCAAGCCCT GGCTAGCCAG GGCCTGGCGC TTTCCGACCT GCGCGGCATT GCCAGCATCA ACCTCAAGGC CGACGAAGCC GGCCTGCAGC AACTGGCCGC ACGCCTGGCC TTGCCCTTGG TGCTGTACCA TAGCGCGCAA CTCCAAGCCT ATGAGCCGTT GCTCAGCCAC CGCTCGGCCA CAGCCTATGC CCACAGCGGC TGTTGGGGCG TGGCCGAGAG TGCGGCACTG GCCCTGGCCA GCCAACAACT GGGCACGGCT AGGTTGCTGC TGCCACGCAA GGTACTAGGC CCGGCGACCC TCGCCCTGGC CGGCTGA
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Protein sequence | MPAFYAGLGC RRGCPADTLQ TLLHQALASQ GLALSDLRGI ASINLKADEA GLQQLAARLA LPLVLYHSAQ LQAYEPLLSH RSATAYAHSG CWGVAESAAL ALASQQLGTA RLLLPRKVLG PATLALAG
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