| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2527 |
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| Symbol | |
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| ID | 5870316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2839439 |
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| End bp | 2842711 |
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| Gene Length | 3273 bp |
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| Protein Length | 1090 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547650 |
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| Product | Hpt sensor hybrid histidine kinase |
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| Protein accession | YP_001668762 |
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| Protein GI | 167033531 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.120042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0845157 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGC TGCTGGCGAG CGCCCTTTTG GCCATCGGCC TGGCCAACGC TAGTGCGCTG
CTGGCCAGCA GCGAACCCCG CCAACTGCTG GCCCGCTCGG TCAGCGCCGC CGCCCCGCTA
ACGCTGTCCG CCGACGACCG CCACTGGCTA CAACAACGTC AACGCCTGGT ACTGGGCACT
TCGCGTCCCG ACTACCCGCC GTTTGAAATC AATGTCAGCC AACAAGACTA TGAGGGCCTG
AGCGCCGACT ACGCCGGCAT CATCGGCGAA CAGCTTGGTA TAGCCATCGA AGTACGTCGC
TTCGACAGCC GCCACGAGGC AATCACCGCC TTGCGTGATG GCCGCATCGA CCTGCTCGGC
AGCTCCAACG GCTTCGAGGC GGCAGATGCT CAGCTCAGCC TCAGTACCCC CTACGCTGAC
GACCTGCCGG TGATCGTCAC CCGAGAAGGG CGCAGCTTGA AAAGCACGCC CGACCTCGCC
GGCATGCGCC TGGCCATGGT CGATCACTAC TTGCCAGCCA GCAGCGTACG CAGCCTCTAC
CCCAAGGCAC AGTTGAGCCT GTACCGTTCC ACGCTGGCCG GGCTTGCGGC GGTCGAGCTG
GGTGAGGCAG ACGCCTACCT AGGCGATGCC CTCAGCACCG ATTTCACTAT CGGAAAAAGC
TTTCAGGGCG CGTTGAAAGT CGACCATTTT TCCCATGTAC CCCCCGAGGT CTTCGCCTTC
GCCGTGGCCA ACGACCACTC GCGCTTGCTG CAACTGGTCG ACAAGGCGCT GGCGCGCATC
AGCGAAAGCG AGCGCCTGAA CATTCTGCGC CGCTGGAGCA GCGGCAACAC CAGCCTGCTA
CTGCAGCGTC ACCTGAGCGC CCTCAGTGCC GAAGAACAAG CCTGGATCGC CGAGCACCCC
ACCGTTAACG TGTTGATCAA TACTTCGCTG GCGCCACTGA CTTTCAACGA CGCCCAGCAT
CACCCCAGCG GCATTACTCT CGACCTGCTC AAGCAGATCG GGTTGCGTAC AGGGCTGCAC
TTCAACCCCA TCGAAAGCAC GTCGGCCTTC GCCATGGTTG AACGCCTGAA GCGAGGCGAT
GCACTGATGA TCGGTGCCCT CGGCTATGGC GCGGAGCGCG TGAAGCAACT GCGCTTTACC
CGCCCCTACC TGGTCAGCCC ACGGGTGCTG GTCACCCGCA GCGACCAGGC ATCGCCTGTA
CAGGCCATGG CCTCGAACGG CCAGCGCATT GCCCTGGTGC GCGGCTCACC GCAGCGGGCC
ATGTTGCAGC AACGCTACCC GCAGGCCAGC CTGATCGAAG TGGACAACCC GCTCGGCCTG
ATGGAGGCGG TGGTCAATGG CAACGCCGAC GCGGCACTGA GCAACCAAAT CAATGCGGCC
TACTACATCA GCCACGTGTT CAAGGGCCGC TTGCGCATCG CCAGCGTGCT CGACGACCAA
CCGGCCATTG CCGCATTCGC CGTCGCCGCC GACCAGCCCC AGCTTCAAGC CATCCTCGAC
AAGGCACTGC TGAGCATTCC GCCCGAAGAG CTTGACCAAC TGATCAACCG CTGGCGCACC
AGCACCCTGG TCAGTGACAG CCCATGGCGC GACTACCGCA CCCTGGCCTT GCAGGTGCTG
GTACTGTCGG CCCTGCTGCT GGCCGGGGTG GTGTTCTGGA ACAGCTACCT GCGCAAGCTG
ATCAACCAGC GTACCGATGC TCAGCACGCG CTGCAGGCAC AGCTGGCGCT GAGCCGCGGG
CTGCTTGAAC AGCTGCGCCA GGCCAAGGAT GACGCCGAAC AGGCCAGCCA GACCAAAAGC
ACCTTCCTGG CCACCATGAG CCATGAAATC CGTACCCCGA TGAATGCCGT GATCGGTCTG
CTGGAAATGG CGTTGGTGGA CAGCCGCGGC GGCCGGTGTG ACACCCAGAC CTTGCAAACC
GCACACGATT CGGCCATTGG CCTGCTTGAG CTGATTGGCG ATATCCTCGA CATTTCCCGT
ATCGAATCCG GGCATATCAG CCTGCAGCCA GTGCCCGCCG ACCTTGTGGA GCTGGTGCGC
TCCACGCTGC GGGTGTTCGA AGGCAATGCA CGGGCCAAAA GCCTGCATCT GCACGGCGAA
ATGCCCGCAG AACCGGTCTG GGTGCTGGCT GATCCGCTGC GGCTCAAGCA GATTCTGTCC
AACCTTATCA GCAACGCCAT CAAGTTCACC AACCGTGGTG AAGTGCAGGC GAGCCTGCTG
TTGCCCAACG TTGCCGACCA CGGCATGCTG GCCATCACAC TGAATGTGCG CGACACAGGC
ATCGGCATCA GCCCCGCCGA CCAGGCCCGG CTGTTCAATG CCTTCGTTCA GGCCGAGGGC
CCAAGAACCC GCCAGGGTGC AGGCCTGGGG TTGGTCATCA GCCGTACCCT GGTCGAATTG
ATGGGCGGCG CCTTGACCCT GCAGAGCGTC GAGGGCGTCG GTACCCGGGT CCAAGTCAAC
CTGCAACTGC CCACCTGCAC TGCACCGACA CAGGCCGAAC GGGACCTGCC GGCACAAGAG
AGCAGCAGTG GCCCGCTGAA TATTCTGGTG GTCGACGACT ACCCTGCCAA CTTGTTGTTG
CTGGAGCGAC AACTGAATAC CTTGGGCCAT CGCGTGACCT TGGCGGAGAA TGGCGAAATC
GCCCTGGCAC ATTGGCAGGC CGCGCGCTTC GACCTGGTGA TTACCGATTG CAGCATGCCG
GTCATGGACG GCCACGAACT CACCCGGCGC ATTCGCGCCC TGGAGGGTGA ACGCGACCTG
TCTGCAAGCC GGATTATTGG CGTGACCGCC AACGCCCAGG CCGAGGAGCG TGCCCGCTGC
CTGGCCAGCG GCATGGACGA ATGCCTGTTC AAACCGATTG GCCTGCGTAC ACTCAAGAAC
CATCTCCCAC AAGTCCACCC TCAACAGCAG TCGCCGACAC CACGCCACAC CGGGTTCGAC
CTGGCCGAAT TGCGCCACCT GACCCAGGGC GACGAACAGT TGACGCGGCA TTTGCTCGAA
CAACTGTCGA TCAGCGTGGG AGAAGACCTG GCCGCCTTGA GCGCACTGGC TGACGACGCA
CCTGATGAGG CTGTGCACAC CCTGGCCCAT CGCATCAAGG GCGGCGCCAA GATGATCAGG
GTGCGCACCG TAGTCAACGA CTGCGAAGCC ATCGAACGCG CCCACGCACA GGGCTTACCG
ACTGTCGAAC AGCGCGCGCA ACTGCAAACC AGCCTGCAGG CATTGCTTGA CGAGATGCGC
GATGCGCTCA ATGCAATTGC AGCGTCGAGC TGA
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| Protein sequence | MKQLLASALL AIGLANASAL LASSEPRQLL ARSVSAAAPL TLSADDRHWL QQRQRLVLGT
SRPDYPPFEI NVSQQDYEGL SADYAGIIGE QLGIAIEVRR FDSRHEAITA LRDGRIDLLG
SSNGFEAADA QLSLSTPYAD DLPVIVTREG RSLKSTPDLA GMRLAMVDHY LPASSVRSLY
PKAQLSLYRS TLAGLAAVEL GEADAYLGDA LSTDFTIGKS FQGALKVDHF SHVPPEVFAF
AVANDHSRLL QLVDKALARI SESERLNILR RWSSGNTSLL LQRHLSALSA EEQAWIAEHP
TVNVLINTSL APLTFNDAQH HPSGITLDLL KQIGLRTGLH FNPIESTSAF AMVERLKRGD
ALMIGALGYG AERVKQLRFT RPYLVSPRVL VTRSDQASPV QAMASNGQRI ALVRGSPQRA
MLQQRYPQAS LIEVDNPLGL MEAVVNGNAD AALSNQINAA YYISHVFKGR LRIASVLDDQ
PAIAAFAVAA DQPQLQAILD KALLSIPPEE LDQLINRWRT STLVSDSPWR DYRTLALQVL
VLSALLLAGV VFWNSYLRKL INQRTDAQHA LQAQLALSRG LLEQLRQAKD DAEQASQTKS
TFLATMSHEI RTPMNAVIGL LEMALVDSRG GRCDTQTLQT AHDSAIGLLE LIGDILDISR
IESGHISLQP VPADLVELVR STLRVFEGNA RAKSLHLHGE MPAEPVWVLA DPLRLKQILS
NLISNAIKFT NRGEVQASLL LPNVADHGML AITLNVRDTG IGISPADQAR LFNAFVQAEG
PRTRQGAGLG LVISRTLVEL MGGALTLQSV EGVGTRVQVN LQLPTCTAPT QAERDLPAQE
SSSGPLNILV VDDYPANLLL LERQLNTLGH RVTLAENGEI ALAHWQAARF DLVITDCSMP
VMDGHELTRR IRALEGERDL SASRIIGVTA NAQAEERARC LASGMDECLF KPIGLRTLKN
HLPQVHPQQQ SPTPRHTGFD LAELRHLTQG DEQLTRHLLE QLSISVGEDL AALSALADDA
PDEAVHTLAH RIKGGAKMIR VRTVVNDCEA IERAHAQGLP TVEQRAQLQT SLQALLDEMR
DALNAIAASS
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