Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2514 |
Symbol | |
ID | 5870303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2824848 |
End bp | 2825783 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547637 |
Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_001668749 |
Protein GI | 167033518 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.304718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGATACC TCAAGCAATT GGCCGCCGGT GTGCTGGCCA GCTCCCTAAG CCTGGCCGCC GCTGCACAAA CCCTGGTGGT CGGCGACCAG AGCTTCAATG CCCGTGCCGT GATGGAAGCA GCCGGTGTGC TCGAAGACCT GCCGTATACC CTCGAATGGA AGCAATTTAC CGCCGGTTCG CCGGTGGCCG AGGCGCTGAA TGTGGGCAGC CTGGACATCG GCTTGCTGGG CGATGCGCCG CCGTTGTTCC TCGGGGCATT GGGCGCGCCG ATCAAGGTGA TCGCGGTCAG CCGGCAGAAC CTCGATGGCG TGGCCATCCT GGCACGCAAG GACTCGAACA TTCACAGCCT CGAAGACTTG CGCGGCAAGC GCGCAGCGAT CTGGAAGGGC TCGTGGAGCC AGCAGTTGCT GTTCAGCGCG CTGGACAAGG CTGCCGTGCC GCGTGATGCC CTGGAGCTGC GCTACCTCAG TGCCCTGGAC GCCTCGCATG CCCTGGATGG TGGCTCGGTG GACGTAATCG CCACCTGGGA GCCTTACGTC ACCCAACAGG AGCGCCAAGG GGCGCGGGTG CTGGCCACGG CCGAAGGGCT GATCCCGGCA CAGAGCTTCG TGGTGGCCAA CGCCAAGGCG GTAGAGGCCA AGCGGGCGCA GATCAGCGAT TTTCTCCAGC GCCTGAAAAA GGCCCGTGAC TGGACCTTGA GCGACCCGGC GCATACCGAA GCCTATGCCG ATGCCTGGGC CAAGCGCACC CGCGCCGACC GCGATATTGC CCGTGCCTGG TTTGCCCGTG CGCGCACCGA TGTGGCACCG CTGAACCCGC AGGTGATCGT GGATGCGCAG AAAACCGTGG ACTTCTTTGC CGGGCTGGGG CTGATCAAGG GATACCCGGC GGCGAGCCTG TTCGATACCT CGTTCGCGCC AGCGTTCGAG CATTGA
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Protein sequence | MRYLKQLAAG VLASSLSLAA AAQTLVVGDQ SFNARAVMEA AGVLEDLPYT LEWKQFTAGS PVAEALNVGS LDIGLLGDAP PLFLGALGAP IKVIAVSRQN LDGVAILARK DSNIHSLEDL RGKRAAIWKG SWSQQLLFSA LDKAAVPRDA LELRYLSALD ASHALDGGSV DVIATWEPYV TQQERQGARV LATAEGLIPA QSFVVANAKA VEAKRAQISD FLQRLKKARD WTLSDPAHTE AYADAWAKRT RADRDIARAW FARARTDVAP LNPQVIVDAQ KTVDFFAGLG LIKGYPAASL FDTSFAPAFE H
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