| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2511 |
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| Symbol | |
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| ID | 5870300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2821063 |
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| End bp | 2822304 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547634 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001668746 |
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| Protein GI | 167033515 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.504694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.653168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAAT CACTCAAACC CTTGCGCTTT CCCCTCGCTG CCCTGGCAGT GGTGGTGATC
AGCGCTTGCG GTCGAACCCC CGACGCCGTG CAGGCTCCCG CCGCGCCGAA AGTCACCGTT
GCCAAGGTGA TCGAACAACC GATCAACGAA TGGGACGAGT TCACCGGCCG CCTCGAAGCA
CCGGAAACCG TAGAGGTGCG CCCACGGGTC TCCGGCCAGA TCGACCAGGT AGCCTTCACT
GAAGGCGCCC AGGTCAAGAA AGGCGACCTG CTGTTCCAGA TCGACCCACG CCCGTTCCAG
GCAGAAGTCC GCCGCCTCGA AGCGCAGTTG CAACAAGCCA AGGCCACCGC CATCCGCAGC
GCCAACGAGG CCCGCCGTGG CGAGCGTCTG CGTGACAGCA ATGCCATTTC CGCCGAACTG
GCCGAATCGC GCAGCAGCGC CGCCGCCGAA GCCCGCGCCG GGGTCGATGC GATCCAGGCT
CAACTCGACC TGGCACGCCT GAACCTCAGC TTCACCCGCG TCACCGCACC CATCAGCGGC
CGCGTCAGCC GCGCCCAGTT CACCGCAGGC AACATCGTCA GCGCCGATGT CACCCCGCTG
ACCAGCGTGG TGTCCACCGA CAAGGTCTAT GCCTACTTCG ACGCCGACGA GCGCGTTTAC
CTCAAGTACA CCCAGCTGGC CCGCGAAGGC CAGCGTGGCC AGAGCACCCC GGTGTACCTG
GGCCTGACCA GCGAAACCGG CAACCCGCAC TTGGGCCAGA TGAACTTCGT CGACAACCAG
GTCAACCCGC GCACCGGCAC CATCCGTGGC CGTGCGGTGT TCGACAACAG CGACGGCCAG
TTCACCCCTG GGCTGTATGC GCGTCTGAAG CTGGTCGGCA GCGCCCAGTA CGACGCCGTA
CTGATCAACG ACGAAGCCGT AGGCACCGAC CTTGGCAAGA AGTTCGTACT GGTCATGGAC
AAGGACAACA AGGCCGCCTA CCGCGCCGTG GAGCTGGGGC CGAAGCTGGA AGGCCTGCGC
ATCGTGCGCA GCGGCCTTGG CAAGGACGAC CGCATCGTGG TCAAGGGCCT GCAGCGCGTG
CGCCCTGGCT CGCCGGTCAC CCCAGAAGAA ACGCCAATGG CCAGCGAACA GACCCTCGCC
GCCCTCGCTC AGCAGCGCCA GGCCCTGGAG GCCAGCAACC CGGCGCCGAA GGTGGCGGGC
AACAACGTGA AAGTCGCCAG CGCCCAGGCG CCACGCGGTT AA
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| Protein sequence | MEQSLKPLRF PLAALAVVVI SACGRTPDAV QAPAAPKVTV AKVIEQPINE WDEFTGRLEA
PETVEVRPRV SGQIDQVAFT EGAQVKKGDL LFQIDPRPFQ AEVRRLEAQL QQAKATAIRS
ANEARRGERL RDSNAISAEL AESRSSAAAE ARAGVDAIQA QLDLARLNLS FTRVTAPISG
RVSRAQFTAG NIVSADVTPL TSVVSTDKVY AYFDADERVY LKYTQLAREG QRGQSTPVYL
GLTSETGNPH LGQMNFVDNQ VNPRTGTIRG RAVFDNSDGQ FTPGLYARLK LVGSAQYDAV
LINDEAVGTD LGKKFVLVMD KDNKAAYRAV ELGPKLEGLR IVRSGLGKDD RIVVKGLQRV
RPGSPVTPEE TPMASEQTLA ALAQQRQALE ASNPAPKVAG NNVKVASAQA PRG
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