Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2504 |
Symbol | |
ID | 5870293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2809956 |
End bp | 2810642 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641547627 |
Product | ThiJ/PfpI domain-containing protein |
Protein accession | YP_001668739 |
Protein GI | 167033508 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGA AAATACTGGT AGTACTGACC AATACAGCCA AGTATCCGAC GCTGAGTCGG GCGACCGGGC TGTGGCTGGG CGAAGCGGTG CACTTTGTCG AGAAGGTCGA AAAGGCCGGC TACACGGTCG ATTATGTCAG CCCACAGGGC GGCTACATCC CCATCGACCC ACACAGCCTG CAGATGGCCC CCGACCTGGA CTGGCAATGG TATGACGACA AGGGCTTCAT GAATCGCCTG GGCAGCACCT TTAGCCCTGG CCAGGTAAAG GCCGAAGAAT ACAGCGTCAT CTACTACACA GGCGGGCACG GAGTGATGTA TGACTTTGCC GAAAACCAAC CGCTGCAGGA GCTGGCACGC AAGGTCTACG AAAATGGCGG CATTGTTGCC GCAGTGTGCC ACGGTGTGGT CGGCCTGCTG AACATCAAGC TCAGCGACAA TAGCCTGCTG CTGAAAGATC GGAAGGTAAC CGGCTTTTCC AATATCGAGG AAAAACTGGT CGAGTTGGAC AACGTGGTGC CATTCCTGAC AGAAAACGAG TTGGGTGGCC GTGGCGGCGT GTACAGCAAG CATGACGATC CATGGAAGCC ATACGTGGTC GATGATGGTC GACTGATCAC CGGGCAGAAC CCTGCCTCTA CCGCGCTGCT CGCCGAAAAA GTCCTCGCGA AACTCCAGGG CAAGTAA
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Protein sequence | MSKKILVVLT NTAKYPTLSR ATGLWLGEAV HFVEKVEKAG YTVDYVSPQG GYIPIDPHSL QMAPDLDWQW YDDKGFMNRL GSTFSPGQVK AEEYSVIYYT GGHGVMYDFA ENQPLQELAR KVYENGGIVA AVCHGVVGLL NIKLSDNSLL LKDRKVTGFS NIEEKLVELD NVVPFLTENE LGGRGGVYSK HDDPWKPYVV DDGRLITGQN PASTALLAEK VLAKLQGK
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