Gene PputGB1_2504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2504 
Symbol 
ID5870293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2809956 
End bp2810642 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content57% 
IMG OID641547627 
ProductThiJ/PfpI domain-containing protein 
Protein accessionYP_001668739 
Protein GI167033508 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA AAATACTGGT AGTACTGACC AATACAGCCA AGTATCCGAC GCTGAGTCGG 
GCGACCGGGC TGTGGCTGGG CGAAGCGGTG CACTTTGTCG AGAAGGTCGA AAAGGCCGGC
TACACGGTCG ATTATGTCAG CCCACAGGGC GGCTACATCC CCATCGACCC ACACAGCCTG
CAGATGGCCC CCGACCTGGA CTGGCAATGG TATGACGACA AGGGCTTCAT GAATCGCCTG
GGCAGCACCT TTAGCCCTGG CCAGGTAAAG GCCGAAGAAT ACAGCGTCAT CTACTACACA
GGCGGGCACG GAGTGATGTA TGACTTTGCC GAAAACCAAC CGCTGCAGGA GCTGGCACGC
AAGGTCTACG AAAATGGCGG CATTGTTGCC GCAGTGTGCC ACGGTGTGGT CGGCCTGCTG
AACATCAAGC TCAGCGACAA TAGCCTGCTG CTGAAAGATC GGAAGGTAAC CGGCTTTTCC
AATATCGAGG AAAAACTGGT CGAGTTGGAC AACGTGGTGC CATTCCTGAC AGAAAACGAG
TTGGGTGGCC GTGGCGGCGT GTACAGCAAG CATGACGATC CATGGAAGCC ATACGTGGTC
GATGATGGTC GACTGATCAC CGGGCAGAAC CCTGCCTCTA CCGCGCTGCT CGCCGAAAAA
GTCCTCGCGA AACTCCAGGG CAAGTAA
 
Protein sequence
MSKKILVVLT NTAKYPTLSR ATGLWLGEAV HFVEKVEKAG YTVDYVSPQG GYIPIDPHSL 
QMAPDLDWQW YDDKGFMNRL GSTFSPGQVK AEEYSVIYYT GGHGVMYDFA ENQPLQELAR
KVYENGGIVA AVCHGVVGLL NIKLSDNSLL LKDRKVTGFS NIEEKLVELD NVVPFLTENE
LGGRGGVYSK HDDPWKPYVV DDGRLITGQN PASTALLAEK VLAKLQGK