| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2500 |
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| Symbol | |
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| ID | 5870289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2805107 |
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| End bp | 2805967 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547623 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_001668735 |
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| Protein GI | 167033504 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00712457 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCTT GTCTGTTCGC CGTGATGTAC TTCTATACCT CGCTGCTCAA GCCACTCGAT
GGCGAAGAAA TCTTTGGCTG GCGCACCCTG TTGACGCTGC CCTGCCTCAC CTTGTTCATG
CTTGTCTCGA AGGACTGGAA ACGGGTCGGC GAGCTGTTGG GCCGGGTAAA GCGCACGCCG
GTGCTGTTGC TCGGCATGGT CGGTACTTCG TGGCTGATGG GCGTGCAGCT GTGGCTGTTT
CTCTGGGCGC CCCTGCACGG GCGTAGCCTG GAAGTGTCGA TGGGCTACTT CTTGCTCCCG
CTGGCCATGG TCCTGACCGG GCGACTGGTG TATGGCGAGC GCCTGTCGCG CCTGCAGAAG
GTGGCGGTGG CTTGCGCCGC GCTGGGCGTG GGCCACGAGC TGTACCAAAA TGGCAGCTTT
GCCTGGGAAA CCCTGTTGGT GACGATCGGT TACCCGATCT ACTTCGTGCT GCGCCGGCGT
TGCCGCACCG ACCACCTGGG TGGCCTGTGG TGCGACATGT GCCTGCTGCT GCCGTGGGCC
CTGTACTTCG TTATCCAGGG CCCGCTATCC AATGCCGACC TGCAAGCACA CCCTGGGCTG
TATGCGCTGA TCCCGATCCT TGGGGCGATC AGCGCCTCGG CCCTGATCGC TTACGTACTG
GCCAGCCGCA TGTTGCCATT CAGCCTGTTC GGCCTGCTCA GCTACGTCGA ACCCGTGCTG
CTGGTGGGGG TGGCATTACT GCTGGGCGAA ACCATCGGCC CGGATCAGTG GTTGACCTAC
CTGCCAATCT GGGCCGCAGT GCTGGTGCTG GTGCTCGAAG GCTTCAAGCA CCTGTTGCGT
CAGCGCCGCC GTTCGGTGTA A
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| Protein sequence | MASCLFAVMY FYTSLLKPLD GEEIFGWRTL LTLPCLTLFM LVSKDWKRVG ELLGRVKRTP
VLLLGMVGTS WLMGVQLWLF LWAPLHGRSL EVSMGYFLLP LAMVLTGRLV YGERLSRLQK
VAVACAALGV GHELYQNGSF AWETLLVTIG YPIYFVLRRR CRTDHLGGLW CDMCLLLPWA
LYFVIQGPLS NADLQAHPGL YALIPILGAI SASALIAYVL ASRMLPFSLF GLLSYVEPVL
LVGVALLLGE TIGPDQWLTY LPIWAAVLVL VLEGFKHLLR QRRRSV
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