| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2490 |
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| Symbol | |
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| ID | 5870279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2790073 |
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| End bp | 2791632 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547613 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001668725 |
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| Protein GI | 167033494 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.138025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCT TCAGTGTCCT TCGTACCACC GTCACCCCCC AGCAACTGCT GTCGGAGCAG
GTGCGGCGCA TTCTTGCCGC GCCGGTGTAC GACCTGGCCA TCGAAACGCC CCTGCAGGCC
GCGCCTGCCT TGTCCGCCAG CCTGGGTAAC CAAGTACTGC TCAAGCGCGA AGACCTGCAG
CCTACGTTCT CGTTCAAGAT TCGTGGGGCC TACACTCGCC TGTCGCGTCT TACCCCCACG
CAGCGCGAGT GCGGGGTGAT CACCGCTTCG GCGGGCAACC ACGCCCAGGG TGTGGCCCTG
GCGGCATCGC ACCTGGGCAT GAAGGCCACC ATCGTCATGC CGACCACCAC CCCGTCGTTG
AAAGTGGAAG GGGTGCGGTC GCGCGGCGGG CATGTGGTGC TGCACGGCGA GAGCTTCCCC
CATGCCCTGG CCCACGCATT GAAACTGGCC GACAGCGAAG GCGCCACCTT CGTACCACCG
TTCGATGACC CGGACGTGAT TGCCGGGCAG GGCACCGTGG CCATGGAAAT CCTCCGTCAG
CGCCCAGGTG CCCTGGACGC CATCTTTGTA CCGGTGGGCG GAGGCGGCTT GATCGCTGGT
ATCGCCGCGT ATGTGAAGTA CCTGCGCCCA GAGGTGAAGG TGATCGGCGT GGAGCCGGAA
GACTCCAACT GTCTGCAGGC CGCCATGGCA GCTGGCGAGC GGGTGATCTT GCCGCAGGTT
GGCACCTTCG CCGATGGCGT GGCGGTGGCG CAGATCGGTG CCCATTGCTT CGAACTGTGC
CGGCACTTCG TCGATGAGGT GGTAACGGTA AGCAGCGACG AACTGTGCGC GGCAATCAAG
GACATCTACG ATGACACCCG CTCGATCACC GAGCCTTCCG GGGCCCTGGC CGTGGCCGGG
ATCAAGAAGT ACGTGGCGCG CGAAGGCGTG CAGGGGCAGA CCCTGGTAGC AATCGACTCC
GGGGCCAATG TCAACTTCGA TCGTTTGCGC CATGTGGCCG AGCGGGCTGA ACTGGGTGAG
CAGCGCGAGG CGATCATCGC CGTCACCATC CCGGAGCAAC CGGGCAGCTT CCGCGCCTTC
TGCCAGGCGC TGGGCAAGCG GCAAATCACC GAATTCAACT ACCGCTACTA CCCCGGCAAG
GAAGCGCGCC TGTTCGTGGG TATGCAAACC CACCCCGTGC ACGACCCACG CGAGCAGTTG
CTGGCCAACT TGCGCGAGCA GGGTTACAAC GTGCTGGATT TGACCGACAA CGAGCTGGCC
AAGCTGCATG TGCGCCATAC CGTGGGCGGG CATGCAGCAC CGGGCGCGGA TGAGCGGGTA
CTGCGTTTCG AGTTCCCCGA GCGGCCTGGG GCGTTGTTGG GCTTTTTGGA GCGGTTGGGC
AAGCGCTGGA ATATCAGCCT GTTCCATTAC CGTAACCATG GGGCAGCGGA GGCGCGGGTG
TTTGCGGCTT TGGAAGTGCC GGCGGATGAG CTGGCGGGGT TGCCATTGGC CCTGGATGAG
ATGGGGTATC GGTATTGGGA TGAGACGGAT AACCCGGCGT ACACGCTGTT TTTGGGCTGA
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| Protein sequence | MTSFSVLRTT VTPQQLLSEQ VRRILAAPVY DLAIETPLQA APALSASLGN QVLLKREDLQ
PTFSFKIRGA YTRLSRLTPT QRECGVITAS AGNHAQGVAL AASHLGMKAT IVMPTTTPSL
KVEGVRSRGG HVVLHGESFP HALAHALKLA DSEGATFVPP FDDPDVIAGQ GTVAMEILRQ
RPGALDAIFV PVGGGGLIAG IAAYVKYLRP EVKVIGVEPE DSNCLQAAMA AGERVILPQV
GTFADGVAVA QIGAHCFELC RHFVDEVVTV SSDELCAAIK DIYDDTRSIT EPSGALAVAG
IKKYVAREGV QGQTLVAIDS GANVNFDRLR HVAERAELGE QREAIIAVTI PEQPGSFRAF
CQALGKRQIT EFNYRYYPGK EARLFVGMQT HPVHDPREQL LANLREQGYN VLDLTDNELA
KLHVRHTVGG HAAPGADERV LRFEFPERPG ALLGFLERLG KRWNISLFHY RNHGAAEARV
FAALEVPADE LAGLPLALDE MGYRYWDETD NPAYTLFLG
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