| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2488 |
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| Symbol | nfrB |
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| ID | 5870277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2787092 |
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| End bp | 2789266 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641547611 |
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| Product | bacteriophage N4 adsorption protein B |
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| Protein accession | YP_001668723 |
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| Protein GI | 167033492 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000916644 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGG CATTCATCGA TTTTCTCACC TATGTGCTGT TCGGCCTGAA AATTCTGGCA
ATCACCCTTG CCTCGCTGAT GTTCCTGTTG GGCCTGGACG ACCTTTTCAT CGACCTGTGC
TATTGGGGGC GAAAGCTGAT CCGGCGTTTT CGCATTTACG ACAAGTTCGA AAAAGCTGAT
GAAAAGCGCT TGTTCGAGGT GCCGGAAAAA CCCCTGGCCA TCATGGTCCC GGCCTGGAAC
GAAGTAGGCG TGGTCGGTGA GATGGCGCGC CTGGCAGCCT CGACGATCGA CTACGAGAAT
TACCAGATTT TCGTCGGCAC CTACCCCAAC GACCCGCAAA CCCAGGCCGA CGTCGACGCG
GTGTGCCTGC ACTACCCCAA CGTGCACAAG GTGGTCTGCG CGCGCCCTGG CCCCACCAGC
AAGGCCGACT GCCTGAACAA CATCATCGAC GCGTTGCTGC GCTTCCAGCA GGACGCGGGC
ATCGAGTTTG CCGGCTTCAT CCTGCATGAC GCCGAAGACG TGATCTCGCC CATGGAGTTG
CGCCTGTTCA ACTACCTGCT GCCAAGCAAG GACATGATCC AGATCCCGGT GTACCCCTAC
GCACCGGAAT GGAAGGGCTT TACTGCCGGC CACTATGTCG ACGAGTTCGC CGAAAACCAC
GGCAAGGACG TGATCGTGCG TGAAGCGCTG ACGGGCCAGG TGCCCAGCGC CGGCGTCGGC
ACCTGCTTCA GCCGCCGCGC CATCAGCGCG CTGCTCGAGG ACGGTGACGG CATCGCCTTC
GACGTACAGA GCCTGACCGA AGACTACGAC ATCGGTTTTC GCCTGAAGCA AAAAGGCATG
AAGTGCATTT TCGCCCGCTA TTCCATCACC GACCCGGCAC TGACCCTGAA GCAGGACTGG
CGCCCGGGCA TGAGCCGCGA GTTCTCCCAG GTAATCTGCG TACGCGAGCA CTTCCCACGT
GACTGGCAGC ATGCCATCCG GCAGAAGTCG CGCTGGATTG TCGGCATCGT GTTCCAGGGC
ACCAGCAACC TCGGGTGGAG CCGCAAAGGC GCACTCAACT ATTTCCTCTG GCGTGACCGC
CGTGGGCTGT TCGCCTACCT GCTGAGCTTT CTGGTCAACC TGTTGCTGCT GGTATTGCTG
GCCATGTGGC TGGTCACGGT GGTCGCGCCG AATTCGTGGC GTTTCATGTC GATCCTAAGC
GACAGCTGGC TGCTGTCGAC CCTGCTGTGG CTGAACGGCC TGATGCTGTT CAACCGGCTG
TTCCAGCGCG CCTGGTTCGT CACCCGCTTC TATGGCATCG GCGAAGGCCT GCTGTCGGCA
CCGCGGATGA TGTGGAGCAA CTTCGTCAAT TTTTTCGCCA ACCTGCGCGC CCTGCGCCAG
GTCATGGAAA TGGGCGATTC GCGGCGCGTG GCCTGGGACA AGACCACCCA CGAGTTCCCC
GCTATCGCCG CACCTGCCCG CATACCACTG GGCCAGCGCC TGGTGGCCAA GGGCCTGATC
AGCGACGAAC AGCTGCAGCA GGCCATCACC AGCCCGGTTC GCCGGCGCCT GGGCCGCGAA
CTGCTACTGC GCGGCTGGTT GAACAGCGAG CAGTTGGTGG CCACCCTGGC CGAACAGTTG
GACTTGCCCT GGGCACCGCT GAACCCGTTC AAGCTCGACC CGCAGTTGAT CGCCAAACTG
CCGCGCAAGC TGGCCACGCA TTATGGCGTG CTGCCGGTGG ATGAAGACGG CGACACGCTG
ATCCTGGCCA GCGAAAGCCC GGTCAGCCAG GTGTCGCTTG GGGTTATCAG CCGCCAGCTG
AAACGCCCGG TCAAGGCCCG CCTGGCACCC CAGGGCCGGG TCACGCTGGG CCTGCGCTAC
CACTACCCAA GCCCCTGGCA GAAGCCAGAA ACCCGCGACA TGCTGGCCGT CCTTGAACGC
CACCAGGACA ACGAAGCGCT GCTGGAGCGG GTCAGCCATC ACCAGGTCAT GCTCGGCGCA
CTGCTGCAGG TGCGGGGCAT GGTCCCGGTC ACCCTGTTCA ACCAGGCGCT GATCGACTTC
GACCCTGAAC ACCAGAGCCT GGGCGAGCAC CTGATCGCCC GAGGCATCAT CACCGAACAG
GTGCTGGAGC AGGCCCTGAT CGAACAGGCC AGCGAACAGC AGGCCGCCTT TGACCTGACC
CGGGAGGTGG CATGA
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| Protein sequence | MSLAFIDFLT YVLFGLKILA ITLASLMFLL GLDDLFIDLC YWGRKLIRRF RIYDKFEKAD
EKRLFEVPEK PLAIMVPAWN EVGVVGEMAR LAASTIDYEN YQIFVGTYPN DPQTQADVDA
VCLHYPNVHK VVCARPGPTS KADCLNNIID ALLRFQQDAG IEFAGFILHD AEDVISPMEL
RLFNYLLPSK DMIQIPVYPY APEWKGFTAG HYVDEFAENH GKDVIVREAL TGQVPSAGVG
TCFSRRAISA LLEDGDGIAF DVQSLTEDYD IGFRLKQKGM KCIFARYSIT DPALTLKQDW
RPGMSREFSQ VICVREHFPR DWQHAIRQKS RWIVGIVFQG TSNLGWSRKG ALNYFLWRDR
RGLFAYLLSF LVNLLLLVLL AMWLVTVVAP NSWRFMSILS DSWLLSTLLW LNGLMLFNRL
FQRAWFVTRF YGIGEGLLSA PRMMWSNFVN FFANLRALRQ VMEMGDSRRV AWDKTTHEFP
AIAAPARIPL GQRLVAKGLI SDEQLQQAIT SPVRRRLGRE LLLRGWLNSE QLVATLAEQL
DLPWAPLNPF KLDPQLIAKL PRKLATHYGV LPVDEDGDTL ILASESPVSQ VSLGVISRQL
KRPVKARLAP QGRVTLGLRY HYPSPWQKPE TRDMLAVLER HQDNEALLER VSHHQVMLGA
LLQVRGMVPV TLFNQALIDF DPEHQSLGEH LIARGIITEQ VLEQALIEQA SEQQAAFDLT
REVA
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