| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2482 |
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| Symbol | |
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| ID | 5870271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2778770 |
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| End bp | 2779945 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641547605 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001668717 |
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| Protein GI | 167033486 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTACTA CCCTCTCCCC GCGCCTGCGC CCATTGGCGC TCCTGGCGTT CCTGAGCCTG
TCTCTGGCCG GCTGCGGCGA CAGCGCCGAG CAAGACGAAA AAGCCCCCAC CCCGCAAGTG
CGGGTGGAAA CCTTGCAACT GCAACCCCTG GCCATCAGCA GTGAGCTAAG CGGCCGTATC
CTGGCCCCGC GCACCGCCGA AGTGCGCGCG CGGGTCGCTG GCGTGGTGCT CAAGCGGGTG
TACCGCGAAG GCAGCGACGT CAAACAGGGC GATGTACTGT TCTTGATCGA CCCGGCGCCG
TTCAAGGCCG ACCATGACAG CGCCCGCGCC ACCCTGGCCA AGGCCGAGGC GACCCTGTAC
CAGGCGCGCC TGCAAGAGCA GCGCTACCGC GAGCTGGTCG ATGACAAGGC CGTCAGCCGC
CAGGAATACG ACAACGCCAA AGCCAGCTTC CTGCAGGCCG ACGCTGCAGT GGCCGAAGCC
AAAGCAGCCC TGGAGCGGGC TCGCCTGAAC CTCGGTTACG CCACTGTGAC CGCGCCGATC
TCCGGCCGTA TCGGCCGCGC CCAGGTCACC GAAGGCGCGC TGGTCGGGCA AAACGAGACC
ACCCCGCTGG CGACCATCCA GCAACTGGAC CCGATCCATG CCGATGTCAC TCAGTCGACC
CGTGAGCTGA ACGCCTTGCG CCGCGCCCTG CGTGCTGGCG AGCTGCAACA GGTAGGCGAC
AGCCAGGCCC GCGCCACCCT GATCCAGGAC GACGGCAGCG CCTACCCGCT GCCGGGCAAG
CTGCTGTTTT CCGACATCAG CGTCGACCCC AGCACCAACC AGATCACCCT GCGCAGCGAG
TTCCCCAACC CGGACCTCGA CCTGCTGCCC GGCAGCTACG TGCGCGTACG CCTGGAGCAG
GCGGTGCAAG CCAAGGGCCT GAGCGTGCCG CAACGCGCCA TCCTGCGCGA CAGCGCCGGC
GTGCCGAAGG TGCTGGTGGT CGACCAGCAG GCCCGCGTCA GCGACCGTCA GGTAGTCCTG
GGCAGCGCCC AGGGCGACCG CTGGATCGTC AGCGAGGGCC TGGCCGCCGG CGAGCGGGTG
GTGATCGAGG GCCTGCAGCA CGTCAAGGCC GGCGACCAGG TGCAGGTCGA CACCACACCC
GGTGCCCCCC CCATCGCTCA GCACATCGGC CAGTGA
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| Protein sequence | MPTTLSPRLR PLALLAFLSL SLAGCGDSAE QDEKAPTPQV RVETLQLQPL AISSELSGRI
LAPRTAEVRA RVAGVVLKRV YREGSDVKQG DVLFLIDPAP FKADHDSARA TLAKAEATLY
QARLQEQRYR ELVDDKAVSR QEYDNAKASF LQADAAVAEA KAALERARLN LGYATVTAPI
SGRIGRAQVT EGALVGQNET TPLATIQQLD PIHADVTQST RELNALRRAL RAGELQQVGD
SQARATLIQD DGSAYPLPGK LLFSDISVDP STNQITLRSE FPNPDLDLLP GSYVRVRLEQ
AVQAKGLSVP QRAILRDSAG VPKVLVVDQQ ARVSDRQVVL GSAQGDRWIV SEGLAAGERV
VIEGLQHVKA GDQVQVDTTP GAPPIAQHIG Q
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