| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2469 |
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| Symbol | |
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| ID | 5870258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2759622 |
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| End bp | 2761532 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641547592 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001668704 |
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| Protein GI | 167033473 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.416044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGAC AACTAATAAC AAACGCCCAC GACCCGCTGC ACGAATCCCG CCAGGCCCGC
CTGAAACTGG CCAGCGAAGG CGAGTTGCCG CTGGGCATGC TGCGCGACGA AATCGACGCT
TCTTGGCGGC GCAGCCTAGG CCATGGCCTG GATTGCCTGC AAGGCGAACA AGTCGGCCTG
GGCCTGGAAC AGGGCCACGA CCTGCGCATG CTGCTGGAGC GCAACCGCTT GCTGGTCGAC
GCCGTCACCC CCGAATTGGA CTACCTGGTC GCCCGCCAGG GCAAGGCCGG TATCGTCATC
CTCGGCGACG CCCAGGCCAA CGTCCTGGCC ATCGAAGGCC AGACGCACGT ACTCAGCCGC
GAGGGCCTGC GCGACCTGCA CCCCGGCAGT TGCTGGAGCG AGTCGCTGCG CGGCACCAAC
GCCATCGGCA CGGCGGTTGT CGAAGGCCGG CCGACGCTGA TCAACTGCGG CGAACATTAC
CTGGACCGCC TCAGCCCGTT CTCCTGCACT TCCGTGCCGC TGCGCGACCC GCGCGGCGAT
GTGATCGGTG TGCTCGACAT CACCCGTGAA GGCGTGATGG CGCAGCCGCA GGACAGCCTG
TCAACGCTGA TGCTGGCCGC TGGCAACATC GAAAGCCGCC TGTTCGGCCT GTGCCACCCA
GAGCAGCTGG TGTTGGCCTT CCACAGCCGT CCACAGTACC TCAACAGTGC CTGGCATGGG
CTGCTGGCGC TGAGCCTGGA CGGTGAAGTG CTGGCCGCCA ACGACAGTGC TTGCCAGTTG
CTGCAGGTGC CGCGCCATGA GCTGATTGGC CGGCGCAGCA CTGACCTGCT CGGCGAGCGT
TCACCTGCTT TTATTGCGCG GCTATGGCAG GGCGGGGTAA GTAGCGTGCA GACGGCCAAG
GGCGAGTTCT ACTTCCGTGC CCTGCAGCTG CCGCGCCATG GCCGGGTCAA TGGCAGTACG
CCGGCAAGCA AGCCGACGCT GAGCAAGCAG TCGCCCGCGC TCGACGCGCT GGCCGGTGGT
GACCCACGGC TGGCGCGCAA CCTGCGCATG GCCCGCCAAG GGTTGGGCAA TGGCCTGCCG
GTGCTGCTGC TGGGCGAGAC CGGTACCGGT AAGGAAGTGG TCGCCCGAGC CTTGCACCAG
GCCAGCCCGC GTGCCGACAA ACCGTTCGTG GCCGTCAACT GCGCGGCCAT CCCCGAAGGG
CTGATCGAGT CCGAGCTGTT CGGCTACCGC GAGGGTGCTT TCACAGGCTC CCGCCGGGGC
GGCATGGTCG GGCGGCTGAT GCAGGCCCAT GGTGGCACAC TGTTCCTCGA CGAAATCGGC
GACATGCCGC TGGCCTTGCA GGCGCGCCTA TTGCGGGTAT TGCAAGAGCG CCGTGTGGCG
CCGCTGGGTG CCGGCGACGA GCAGGACATC GACGTGGCGT TGATTTGCGC CACCCACCGC
GACCTCAAGC GTTTAGTGCA GGAGCAGCAC TTCCGCGAAG ACCTGTACTA CCGGGTCAAC
GGCGTGTCGC TGCGCCTGCC GGCACTGCGC GAGCGTGACG ACCTGGCCGC GATCATTCAA
GGCCTGCTGG ACAAGTCCGA TGCCCGTGGC GTCACGCTAG ACCCGGCGTT GGCGGCATTG
CTCGAAGGCT TCGACTGGCC AGGCAACATC CGCCAGCTGG AAATGGTGGT GCGCACGGCA
CTGGCCATGC GCGAGAACGG CGAGCAGGTG CTGACGCTGG ACCACCTCAC CGATTGCCTA
CTGGACGAGT TGGCCAGCGG CTCGGCGCCC TCCGGTAGCC TCAAGGACAA CGAGCTGGAG
CTGATCCGTG GCGCCCTTGC GCGCCACCAG GGCAACGTGT CGGCCGCCGC CGAAGCACTG
GGCATCAGCC GGGCGACGCT GTACCGCAAG CTCAAGCAGT TGCGCGGCTG A
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| Protein sequence | MARQLITNAH DPLHESRQAR LKLASEGELP LGMLRDEIDA SWRRSLGHGL DCLQGEQVGL
GLEQGHDLRM LLERNRLLVD AVTPELDYLV ARQGKAGIVI LGDAQANVLA IEGQTHVLSR
EGLRDLHPGS CWSESLRGTN AIGTAVVEGR PTLINCGEHY LDRLSPFSCT SVPLRDPRGD
VIGVLDITRE GVMAQPQDSL STLMLAAGNI ESRLFGLCHP EQLVLAFHSR PQYLNSAWHG
LLALSLDGEV LAANDSACQL LQVPRHELIG RRSTDLLGER SPAFIARLWQ GGVSSVQTAK
GEFYFRALQL PRHGRVNGST PASKPTLSKQ SPALDALAGG DPRLARNLRM ARQGLGNGLP
VLLLGETGTG KEVVARALHQ ASPRADKPFV AVNCAAIPEG LIESELFGYR EGAFTGSRRG
GMVGRLMQAH GGTLFLDEIG DMPLALQARL LRVLQERRVA PLGAGDEQDI DVALICATHR
DLKRLVQEQH FREDLYYRVN GVSLRLPALR ERDDLAAIIQ GLLDKSDARG VTLDPALAAL
LEGFDWPGNI RQLEMVVRTA LAMRENGEQV LTLDHLTDCL LDELASGSAP SGSLKDNELE
LIRGALARHQ GNVSAAAEAL GISRATLYRK LKQLRG
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