Gene PputGB1_2465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2465 
Symbol 
ID5870254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2756430 
End bp2757281 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content64% 
IMG OID641547588 
Productcurli production assembly/transport component CsgG 
Protein accessionYP_001668700 
Protein GI167033469 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTC TGCTGAGCAC GCTGCTGATC CTCACCGCCC TTGGCCTGCA AACGGGTTGC 
AGCCTGCGCG AACCCATGTC GGCCGAACAG GACTCGGAAA CCCCGACCCT GACCCCACGG
GCCTCGACCT ACTACGACCT GATCAACATG CCACGGCCCA AAGGCCGCCT GATGGCCGTG
GTTTACGGCT TCCGCGATCA GACCGGGCAG TACAAGCCGA CCCCGGCCAG CTCGTTCTCC
ACCAGCGTTA CCCAGGGTGC GGCCAGCATG CTGATGGACG CCCTGAGCGC CAGCGGCTGG
TTCGTGGTGC TGGAGCGTGA AGGCCTGCAG AACTTGCTGA CCGAGCGCAA GATCATCCGT
GCTTCGCAGA AAAAACCGGA TGTACCTGAA AACATCATGG GCGAGCTGCC GCCGCTGCAG
GCCGCCAACC TGATGCTCGA AGGCGGCATC ATCGCCTACG ACACCAACGT GCGCAGCGGC
GGCGAGGGGG CTCGCTACCT GGGGATAGAC ATCTCCCGCG AGTATCGGGT GGACCAGGTG
ACCGTGAACC TGCGCGCCGT GGACGTACGC ACCGGCCAGG TGCTGGCCAA CGTGATGACC
AGCAAGACCA TCTACTCGGT TGGGCGCAGT GCCGGGGTGT TCAAGTTCAT TGAATTCAAG
AAGCTGCTGG AGGCCGAGGT GGGGTACACC ACCAACGAAC CGGCGCAGCT GTGCGTGCTG
TCGGCGATCG AAGCGGCGGT GGGGCATTTG CTGGCGCAGG GGATCGAGCG GCGGTTGTGG
CAGGTGGCGG GGGATCCAGC GGATGGCAAG GCGACGGTGG ACAAGTATTT GAGCCAGAAT
CAGCAGCCGT GA
 
Protein sequence
MKRLLSTLLI LTALGLQTGC SLREPMSAEQ DSETPTLTPR ASTYYDLINM PRPKGRLMAV 
VYGFRDQTGQ YKPTPASSFS TSVTQGAASM LMDALSASGW FVVLEREGLQ NLLTERKIIR
ASQKKPDVPE NIMGELPPLQ AANLMLEGGI IAYDTNVRSG GEGARYLGID ISREYRVDQV
TVNLRAVDVR TGQVLANVMT SKTIYSVGRS AGVFKFIEFK KLLEAEVGYT TNEPAQLCVL
SAIEAAVGHL LAQGIERRLW QVAGDPADGK ATVDKYLSQN QQP