Gene PputGB1_2461 details

Gene Information

• Locus tag: PputGB1_2461
• ID: 5870250
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida GB-1
• Kingdom: Bacteria
• Replicon accession: NC_010322
• Strand: +
• Start bp: 2754720
• End bp: 2755094
• Gene Length: 375 bp
• Protein Length: 124 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641547584
• Product: type II secretion system protein G
• Protein accession: YP_001668696
• Protein GI: 167033465
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 0.508549
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 53
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAACGCA GCAAAGGCTT CACCCTGATC GAACTGCTGG TGGTCATGGC GATCATCGCC 
ACGCTGATGA CCATCGCCAT GCCGCGCTAT TTCAACAGCC TGGAAAGCTC CCGCGAGGCC 
ACCCTGCGCC AGAGCCTGGC GGTGCTGCGC GAGTCATTGG ACCACTACTA CGGCGACACC 
GGCCATTACC CGGACTCGCT GGAGCAACTG GTGGAGCAAC GCTACCTGCG CAACACCCCG 
GTCGACCCTA TTACCGAACG CAGCGATGCC TGGCAGTTGG TGCCACCACC CGAAGGCGTG 
GCCGGCGGCG TGGCCGATAT CAAGAGCGGT GCCACAGGGA GGGCGCGTGA TGGCAGCCTC 
TTCGCTGAAT GGTAA 

 

Protein sequence

MKRSKGFTLI ELLVVMAIIA TLMTIAMPRY FNSLESSREA TLRQSLAVLR ESLDHYYGDT 
GHYPDSLEQL VEQRYLRNTP VDPITERSDA WQLVPPPEGV AGGVADIKSG ATGRARDGSL 
FAEW