| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2450 |
|---|
| Symbol | |
|---|
| ID | 5870239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 2744492 |
|---|
| End bp | 2745157 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641547573 |
|---|
| Product | electron transport protein SCO1/SenC |
|---|
| Protein accession | YP_001668685 |
|---|
| Protein GI | 167033454 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0486605 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTG CAAGCTCCCG CCGCGCAAGC ATGCGCGGGT TCGACTGGCT GGTGCTGGGT
GGTTGCCTGT GGATTCTGGC CTCGGTGGCC TTCGCCCACG AAGGCCATGC GCCACAGGCC
CCCGAGCCGC AGCCGGCGCC GCAGGCGATG ACCAGTGGTG GCGGCACCCG TGATGCCCAG
ACCTGGTTCA CCGACACGGT GTTGAAGGAC CAGAATGGCC GCGAGCTGCG CTTTTACAGC
GACGTGCTCA AGGACAAGGT GGTGATGCTT AACGTGATCT TCACCCACTG CACCGACGCG
TGTCCGCTGA TTACCCGCAA GTTGCGTGAA GTGCGCGAAG CGATGGGGCC GCAGCTGGCC
AGCCAGGTGA CTTTCGTGTC GATCAGCAGT GACCCGCTGA ACGACACCCC GCAGGCATTG
AAGGCGTTCG CCGAGAAGCA GGGCGTGGAT GGGCCGAACT GGCTGTTCTT GACCGGCGAC
AAGGCCAATG TCGACCTGGT GCTGGGGCGT ATAGGGCAGT TCCTGCCCAG CCCTGAGCAG
CATTCGACTC AGCTGATTGC CGGTGACGTG GCCGGCAAAC GCTGGAGCAA GATCCGCCCG
GATGCGCCAC CGGCGGCGAT TGCCCAGCGC ATGCAGCTGT TGGCTCAGCC ACTGGCAGGC
CGGTGA
|
|---|
| Protein sequence | MSTASSRRAS MRGFDWLVLG GCLWILASVA FAHEGHAPQA PEPQPAPQAM TSGGGTRDAQ
TWFTDTVLKD QNGRELRFYS DVLKDKVVML NVIFTHCTDA CPLITRKLRE VREAMGPQLA
SQVTFVSISS DPLNDTPQAL KAFAEKQGVD GPNWLFLTGD KANVDLVLGR IGQFLPSPEQ
HSTQLIAGDV AGKRWSKIRP DAPPAAIAQR MQLLAQPLAG R
|
|---|
| |