| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2438 |
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| Symbol | |
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| ID | 5870227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2728497 |
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| End bp | 2730158 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547561 |
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| Product | malonate decarboxylase, alpha subunit |
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| Protein accession | YP_001668673 |
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| Protein GI | 167033442 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.189192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATAA CTCAGAATCC ACCGCCGCAA TGGTCGCGAC GGCGCGCCGA AAAGCAGCGC
CGCCTCGATC GGGTCCGCCA CCTTGCCGAT GGCGTGGTGC TGCCCACCGA CCGCATCGTC
GAAGCCCTGG AGTTGCTGCT GGCGCCCGGC GACCGGGTAG TGCTGGAAGG CAACAACCAG
AAGCAGGCCG ACTTCCTTTC CCGCTCGCTG GCCAAAGTCG ACCCCGGGCG CCTGCACGAC
CTGCACATGA TCATGCCCAG TGTCAGCCGC GCCGAGCACC TGGACCTGTT CGAGCGCGGC
ATCGCGCGCA AGCTCGACTT TTCTTTCGCT GGCCCGCAGA GCCTGCGCAT TGGCCAGTTG
CTGGAAGATG GCCTGCTCGA AGTCGGTGCC ATCCACACCT ATATCGAGCT TTACTCGCGG
CTGCTGGTCG ACCTGATCCC CAACGTTACC CTGGTAGCGG GCTTCATGGC CGACCGCGAC
GGCAACCTGT ACACCGGCCC CAGCACCGAA GACACACCGG CCCTGGTGGA GCCGGCCGCG
TTCAGCGATG GCATCGTCAT CGCCCAGGTC AACCAACTGG TGGACCGCGT GGATGACCTG
CCACGGGTCG ATATCCCCGC GTCGTGGGTC GATTTCGTGG TGGTTGCCGA CCAGCCTTTC
TATATCGAGC CGCTGTTCAC CCGCGACCCG CGCCATATCA AGCCGGTGCA TGTGCTGATG
GCGATGATGG CCATACGTGG CATCTACGAG AAACATCAGG TGCAGTCGTT GAACCACGGC
ATTGGCTTCA ACACTGCCGC CATCGAGCTG ATCCTGCCGA CCTACGGCGA GTCTCTGGGC
CTCAAGGGCA AGATCTGCCG CAACTGGACG CTCAACCCGC ACCCGACACT GATCCCGGCC
ATCGAAACCG GCTGGGTGCA AAGCGTGCAC TGTTTCGGCA CCGAGCTGGG CATGGAGGAC
TACATTGCCC AGCGCCCGGA TGTGTTCTTC ACGGGCCGCG ATGGCTCGCT GCGTTCCAAC
CGCATGATGT GCCAGCTGGC CGGGCAGTAC GCGGTCGATC TGTTCATTGG CGCCACCTTG
CAGGTGGATG GTGATGGCCA TTCCTCGACC GTGACCCGTG GCCGCCTGGC CGGCTTCGGC
GGTGCGCCGA ACATGGGCCA CGACCCTCGT GGCCGGCGCC ACGCGACCCC GGCCTGGCTC
GACATGACCG TGCCGGAAAC AATGCTGGAG CGTGGCCGCA AGTTGGTGGT GCAGATGGTC
GAGACCTACC AGGAAGGCGG CAAGCCCACC TTCGTGGAAA CCCTCGATGC CGTGGAGGTG
GCCAAAAAGG CCGGTATGCC GCTGGCACCA GTGATGATCT ACGGCGACGA CGTCACCCAC
CTGCTGACCG AGGAGGGCAT TGCCTACCTG TACAAGGCCC GTAGCCTGGA AGAGCGCCAG
CAGATGATCG CGGCCGTGGC CGGGGTTACT GCCATCGGCC TGCGGCACGA CCCGAAGGAC
ACCCTGCGTA TGCGCCAGCA GGGCCTGATC GCCTTGCCCG AAGACCTCGG CATCCGCCGT
ACCGACGCCA GCCGTGAGCT GCTGGCCGCG CGCAGCATCG CCGACCTGGT CGAATGGTCC
GGCGGCCTTT ACAACCCGCC TGCACGGTTC AGGAGCTGGT GA
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| Protein sequence | MTITQNPPPQ WSRRRAEKQR RLDRVRHLAD GVVLPTDRIV EALELLLAPG DRVVLEGNNQ
KQADFLSRSL AKVDPGRLHD LHMIMPSVSR AEHLDLFERG IARKLDFSFA GPQSLRIGQL
LEDGLLEVGA IHTYIELYSR LLVDLIPNVT LVAGFMADRD GNLYTGPSTE DTPALVEPAA
FSDGIVIAQV NQLVDRVDDL PRVDIPASWV DFVVVADQPF YIEPLFTRDP RHIKPVHVLM
AMMAIRGIYE KHQVQSLNHG IGFNTAAIEL ILPTYGESLG LKGKICRNWT LNPHPTLIPA
IETGWVQSVH CFGTELGMED YIAQRPDVFF TGRDGSLRSN RMMCQLAGQY AVDLFIGATL
QVDGDGHSST VTRGRLAGFG GAPNMGHDPR GRRHATPAWL DMTVPETMLE RGRKLVVQMV
ETYQEGGKPT FVETLDAVEV AKKAGMPLAP VMIYGDDVTH LLTEEGIAYL YKARSLEERQ
QMIAAVAGVT AIGLRHDPKD TLRMRQQGLI ALPEDLGIRR TDASRELLAA RSIADLVEWS
GGLYNPPARF RSW
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