| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2431 |
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| Symbol | |
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| ID | 5870220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2721201 |
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| End bp | 2723174 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547554 |
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| Product | peptidase U32 |
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| Protein accession | YP_001668666 |
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| Protein GI | 167033435 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGCC CTGCCCGTGA CGTGGCCATC GCCCGTGAAG CGATCCTGCA CGGCGCTGAC
GCCATCTATA TCGGCGGCCC AAGCTTCGGC GCGCGCCATA ACGCCTGCAA CGACGTCAGC
GATATTGCCG AACTGGTCGA GTTCGCCCGT CGCTACCATG CACGCGTGTT CACCACGATC
AACACCATCC TCCACGACAA CGAGCTGGAA CCGGCGCGCA AGCTGATCCA TCAGCTGTAC
GACGCCGGCG TCGACGCACT GATCGTGCAG GACCTGGGGG TGATGGAGCT GGACATTCCG
CCCATCGAGC TGCACGCCAG TACCCAGACC GACATCCGTA CCCTGGAACG GGCCAAGTTC
CTCGACCAGG CCGGTTTCTC GCAGCTGGTA CTGGCCCGTG AGCTGAACCT GCAGCAGATC
CGCGCCATCG CCGCTGAAAC CGATGCCGCC ATCGAGTTCT TCATCCACGG CGCGCTGTGC
GTAGCGTTTT CCGGCCAATG CAACATTTCC CATGCGCAGA CCGGCCGCAG TGCCAACCGT
GGCGACTGCT CGCAAGCCTG CCGCCTGCCC TACACCCTTA AAGATGACCA GGGCCGCGTG
GTGGCGTTCG AGAAGCACCT GCTGTCGATG AAGGACAACA ACCAGACCGC CAACCTGGCC
GACCTGGTGG ATGCCGGCGT GCGTTCGTTC AAGATCGAGG GCCGCTACAA GGACATGGGC
TATGTGAAGA ACATCACCGC CCACTACCGC AAAGAGCTCG ACGCCATTCT TGAAGGCCGC
CCGGAATACG CCCGTGCGTC CAGCGGCCGG ACCCAGCACT TCTTCCTGCC CGACCCTGAC
AAAACGTTCC ACCGTGGCAG CACCGACTAC TTCGTCACCG ACCGCAAGGT CGATATCGGC
GCCTTCGACT CGCCAACCTT CACCGGCCTG CCGGTGGGTG TGGTGGAAAA GGTCGGCAAG
CGTGACATGC AAGTGGTCAC CGACGTACCG CTGACCAACG GCGACGGCCT CAATGTGCTG
GTCAAACGCG AAGTGGTGGG CTTTCGCGCC AACATCGCCG AACCCCGTGG CGAGTTCGAG
GAAGACGGCA GCAAGCGCTA CCGCTACCGC GTCGAACCCA ACGAAATGCC CGAAGGCCTG
TACAAGCTGC GGCCCAACCA CCCGCTGTCG CGCAACCTCG ACCACAACTG GCAGCAAGCC
CTGCAACGCA CCTCCTCCGA GCGCCGGGTC GGTGTGGAAT GGCACGCAGT ACTGCGCGAG
CAGCGCCTGA TGCTTACCCT TGGCAGTGAA GAAGGTGTGA GCGTGCAGGT AGCCCTGGAC
GGCCCGTTCG GCGCAGCCAA CAAGCCGCAG CAGGCGCTGG AACAACTGCA CGACCTGCTC
GGCCAACTGG GTACCACGAT GTACCATGCC GACAGCATCC AGCTGGATGC CCCGCAGGCG
TACTTCATCC CCAACTCACA GCTCAAGGCT CTGCGCCGCG AAGCCATCGA GGCACTGACC
GAAGCACGCG TGCAGGCGCA CCCGCGCGGC GGGCGCAAGG CCGAGACCAC GCCGCCGCCG
GTATACCCCG AGTCGCACCT GTCGTTCCTG GCCAACGTGT ACAACCAGAA GGCGCGCGAT
TTCTACCACC GCCACGGCGT GCAACTGATC GACGCGGCCT ACGAGGCCCA TGAAGAACAC
GGCGAAGTAC CGGTGATGAT CACCAAGCAC TGCCTGCGCT TCTCCTTCAA TTTGTGCCCC
AAGCAGGCCA AAGGCGTAAC CGGTGTGCGC ACCAAGGTGG CACCGATGCA GCTGATTCAG
GGTGACGAAG TGCTGACCCT GAAGTTCGAC TGCAAGCCGT GCGAGATGCA TGTGATCGGC
AAGATGAAAA ACCACATCAT CGACCTGCCG ACCCCAGGTA GCGCGGTGGC GCAGGTGGTG
GGGCATATCA GCCCGGAAGA CCTGTTGAAG ACGATTCCGC GCGGGGCGCA TTGA
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| Protein sequence | MLSPARDVAI AREAILHGAD AIYIGGPSFG ARHNACNDVS DIAELVEFAR RYHARVFTTI
NTILHDNELE PARKLIHQLY DAGVDALIVQ DLGVMELDIP PIELHASTQT DIRTLERAKF
LDQAGFSQLV LARELNLQQI RAIAAETDAA IEFFIHGALC VAFSGQCNIS HAQTGRSANR
GDCSQACRLP YTLKDDQGRV VAFEKHLLSM KDNNQTANLA DLVDAGVRSF KIEGRYKDMG
YVKNITAHYR KELDAILEGR PEYARASSGR TQHFFLPDPD KTFHRGSTDY FVTDRKVDIG
AFDSPTFTGL PVGVVEKVGK RDMQVVTDVP LTNGDGLNVL VKREVVGFRA NIAEPRGEFE
EDGSKRYRYR VEPNEMPEGL YKLRPNHPLS RNLDHNWQQA LQRTSSERRV GVEWHAVLRE
QRLMLTLGSE EGVSVQVALD GPFGAANKPQ QALEQLHDLL GQLGTTMYHA DSIQLDAPQA
YFIPNSQLKA LRREAIEALT EARVQAHPRG GRKAETTPPP VYPESHLSFL ANVYNQKARD
FYHRHGVQLI DAAYEAHEEH GEVPVMITKH CLRFSFNLCP KQAKGVTGVR TKVAPMQLIQ
GDEVLTLKFD CKPCEMHVIG KMKNHIIDLP TPGSAVAQVV GHISPEDLLK TIPRGAH
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