| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2429 |
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| Symbol | |
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| ID | 5870218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2718972 |
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| End bp | 2720375 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641547552 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001668664 |
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| Protein GI | 167033433 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.41681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGC GTAATCTGTT CGTGCCGATT GCCATGGCTT TGCTGGCCAG CGGCTGCTCC
CTGGCACCGA CCTACCAGCG CCCCGAGGCG CCGGTGGCGA ACCAATGGAG CGACGCCACC
AACCACACAG GGCAGCAGGT GGACAAGCTG GGCTGGCAAG CCTTTATCGT CGACCCGACG
TTGCGCCAGT TGGTGAACAC GGCGCTGGAC GACAACCGCT CGCTGCGCCA GACGCTGCTG
GACATCGACC AGGCACGGGC GCAGTTCCGC ATCCAGCGCG CGGACCGTGT GCCGGGGCTG
AGCGCTGGTG CTTCCGGTAA TCGACAGCAC CAGCCTGCCG GGCTGTCCAG TGATGGCCGC
GAGGGCGCCG CCAGCACCTA TCAGGTTGGC CTTTCGTTGC CTGAGTACGA GGTCGACCTG
TTCGGTCGGG TGAAAAGCCT GAGCGATGCA GCGCTGGAGC AATACTTGGC CACGGAGGAG
GCTGGCCGTG CGGCGCGCAT CGCCTTGATC GCCGAGGTGA GCCAGGCCTA CCTGACCCTG
GACGGTAGCG AGCGGCGCCT GGCGTTGATC CGGCAGACCC TGGCCAGCCG CGAGCGCTCG
CTGGCGCTGA TCGACCAACG CCGCGCCGCC GGGACCGCCA CGGCGCTGGA CCACCAGGAA
GCGCTCGGCC TGGTCGAGCA AGCGCGCGCC GAGCAAGAAA GCAACCTGCG CCAGCGCCAG
CAGGCCTACA ACGCCTTGGT GTTGCTGGTA GGCAATAGTG AGGCGACCCA GGCTCTACCG
GTCGAACGCC AGGCAGAACC CAGCGTGCTG CAGGACATTA CCCCCGGTGC CCCGTCGGCG
CTGCTTGAAC GGCGCCCGGA CATCCTTGCT GCCGAGCACC GCTTGCGGGC GCGCAATGCC
GATATCGGCG CGGCGCGGGC GGCGTTCTTC CCGCGTATCA GCCTGACCGG CAGCTTGGGT
ACGTCGAGTA CGCAGGTGTC TGGTTTGTTC GAGGGCGGTT CGCGTAGCTG GAGCTTCATG
CCCCAGGTGT CGCTGCCCAT ATTCGATGCT GGGCGCAATC AGGCTGGGCT GAGCCTGGCC
GAGGCGCGCA AGGATTCGGC GGTGGCAGCT TATGAAGGGG CGATCCAGCA GGCGTTCCGC
GAAGTAGCGG ATGCCCTGGC GGCCACCGAT ACCCTGCGCC GTGAGGAAGT CGCGCGGCGG
GCCCTGGCCG ATACCAGTCG CGCCACCTTG ACCCTGGCCA AGGCGCGCTA TGAGGGTGGG
ATCGACAGCC ACCTGCGTTA CCTGGATGCG CAGCGTAGCG ATTTTGTGAA TGAAGCGGCG
TACATCGAGG CGAGTACACA ACGGCAGCTT GCGCTGGTGG ACCTGTTCCG CGCCTTGGGC
GGCGGCTGGC CGGCACGCGG CTGA
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| Protein sequence | MAMRNLFVPI AMALLASGCS LAPTYQRPEA PVANQWSDAT NHTGQQVDKL GWQAFIVDPT
LRQLVNTALD DNRSLRQTLL DIDQARAQFR IQRADRVPGL SAGASGNRQH QPAGLSSDGR
EGAASTYQVG LSLPEYEVDL FGRVKSLSDA ALEQYLATEE AGRAARIALI AEVSQAYLTL
DGSERRLALI RQTLASRERS LALIDQRRAA GTATALDHQE ALGLVEQARA EQESNLRQRQ
QAYNALVLLV GNSEATQALP VERQAEPSVL QDITPGAPSA LLERRPDILA AEHRLRARNA
DIGAARAAFF PRISLTGSLG TSSTQVSGLF EGGSRSWSFM PQVSLPIFDA GRNQAGLSLA
EARKDSAVAA YEGAIQQAFR EVADALAATD TLRREEVARR ALADTSRATL TLAKARYEGG
IDSHLRYLDA QRSDFVNEAA YIEASTQRQL ALVDLFRALG GGWPARG
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