| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2416 |
|---|
| Symbol | |
|---|
| ID | 5870205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 2701344 |
|---|
| End bp | 2701772 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641547539 |
|---|
| Product | transmembrane pair domain-containing protein |
|---|
| Protein accession | YP_001668651 |
|---|
| Protein GI | 167033420 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4125] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.371458 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACG TGTCCTTTAC CGAACGCCTG GTTCACGCCG TTGGCTACGA AGTGTTCGCG
GTGTTGCTGT GTGCGCCGCT GCTGTCCTGG ATCATGGGCA AGTCACTGGC GACGGCGGGC
GCGCTGGCTG TGACCCTGTC GGTCATCGCC ATGTTGTGGA ACATGGTCTA CAACGCGCTG
GTCGACCGCT ACGTGCAGGC CGAGCGTATC CACTGGAAGG CCCGTGCGCG TTTCGTGCAC
GGCCTGGGCT TCGAAGCCGG GCTGGTGGTG TGGTGTTTGC CGGTGGCGGC GTGGATGCTG
GATATTTCGC TGGCGCAGGC GTTCATGGTG GAGCTGGGCT TCTTCGTCAT CATTCTGCCC
TACACCGTGC TGTACAACTG GGCCTTCGAC AAAGCCCGGC ATCTGCTGAT GCAGCGTCGC
CTGGCGTGA
|
|---|
| Protein sequence | MKHVSFTERL VHAVGYEVFA VLLCAPLLSW IMGKSLATAG ALAVTLSVIA MLWNMVYNAL
VDRYVQAERI HWKARARFVH GLGFEAGLVV WCLPVAAWML DISLAQAFMV ELGFFVIILP
YTVLYNWAFD KARHLLMQRR LA
|
|---|
| |